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GENE CARD

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Gene Card

Best human hits

COL21A1; COL22A1; MATN1

Species

M.occidentalis

Unique Gene ID

Moocci.g00015115

Gene Model ID

Moocci.CG.ELv1_2.S458968.g15115

Location

S458968:63453..69786

Transcript Models and Sequences

  Moocci.CG.ELv1_2.S458968.g15115.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term Analysis Definition
vWFA_dom_sf Gene3D von Willebrand factor A-like domain superfamily
vWFA_dom_sf SUPERFAMILY von Willebrand factor A-like domain superfamily
Collagen Pfam Collagen triple helix repeat
VWF_A SMART von Willebrand factor, type A
VWF_A Pfam von Willebrand factor, type A
VWF_A ProSiteProfiles von Willebrand factor, type A

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

10 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
extracellular matrix structural constituent Hs molecular function 72.8 1.10e-13
calcium ion binding Hs molecular function 72.8 1.10e-13
protein binding Hs molecular function 72.8 1.10e-13
extracellular region Hs cellular component 80.5 6.37e-16
proteinaceous extracellular matrix Hs cellular component 80.5 6.37e-16
collagen trimer Hs cellular component 80.5 6.37e-16
cytoplasm Hs cellular component 80.5 6.37e-16
endoplasmic reticulum lumen Hs cellular component 80.5 6.37e-16
cytosol Hs cellular component 80.5 6.37e-16
extracellular matrix Hs cellular component 80.5 6.37e-16

GO (InterProScan)

No result

GO Term Analysis Type e-value