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GENE CARD

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Gene Card

Best human hits

GAPVD1; RABGEF1; RIN3

Species

M.occidentalis

Unique Gene ID

Moocci.g00016676

Gene Model ID

Moocci.CG.ELv1_2.S477787.g16676

Location

S477787:941..12846

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

8 results

IPR Term Analysis Definition
Znf_A20 Pfam Zinc finger, A20-type
Znf_A20 SMART Zinc finger, A20-type
Znf_A20 ProSiteProfiles Zinc finger, A20-type
VPS9_dom_sf Gene3D VPS9 domain superfamily
VPS9 SMART VPS9 domain
VPS9 Pfam VPS9 domain
VPS9 ProSiteProfiles VPS9 domain
VPS9_dom_sf SUPERFAMILY VPS9 domain superfamily

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

19 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
DNA binding Hs molecular function 387 1.77e-128
guanyl-nucleotide exchange factor activity Hs molecular function 86.3 2.23e-17
GTPase activator activity Hs molecular function 86.3 2.23e-17
protein binding Hs molecular function 387 1.77e-128
nucleolus Hs cellular component 387 1.77e-128
cytoplasm Hs cellular component 387 1.77e-128
endosome Hs cellular component 387 1.77e-128
early endosome Hs cellular component 387 1.77e-128
cytosol Hs cellular component 387 1.77e-128
zinc ion binding Hs molecular function 387 1.77e-128
membrane Hs cellular component 86.3 2.23e-17
Rab guanyl-nucleotide exchange factor activity Hs molecular function 387 1.77e-128
Rab GTPase binding Hs molecular function 387 1.77e-128
cytoplasmic vesicle Hs cellular component 56.2 4.16e-08
early endosome membrane Hs cellular component 387 1.77e-128
GTPase activating protein binding Hs molecular function 86.3 2.23e-17
cadherin binding Hs molecular function 86.3 2.23e-17
metal ion binding Hs molecular function 387 1.77e-128
recycling endosome Hs cellular component 387 1.77e-128

GO (InterProScan)

2 results

GO Term Analysis Type e-value
DNA binding Pfam molecular function 2.1E-12
zinc ion binding Pfam molecular function 2.1E-12