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GENE CARD

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  1. EST 'AK114469'

Gene Card

Best human hits

AP1B1; AP2B1; AP4B1

Species

M.occidentalis

Unique Gene ID

Moocci.g00017810

Gene Model ID

Moocci.CG.ELv1_2.S488364.g17810

Location

S488364:7461..10293

Transcript Models and Sequences

  Moocci.CG.ELv1_2.S488364.g17810.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

14 results

IPR Term Analysis Definition
AP_beta PANTHER AP complex subunit beta
ARM-like Gene3D Armadillo-like helical
Clathrin_b-adaptin_app_Ig-like Gene3D Clathrin adaptor, beta-adaptin, appendage, Ig-like subdomain
Clathrin_app_Ig-like_sf SUPERFAMILY Clathrin adaptor, appendage, Ig-like subdomain superfamily
B-adaptin_app_sub_C SMART Beta-adaptin appendage, C-terminal subdomain
B-adaptin_app_sub_C Pfam Beta-adaptin appendage, C-terminal subdomain
Clathrin_a/b/g-adaptin_app_Ig Pfam Clathrin adaptor, alpha/beta/gamma-adaptin, appendage, Ig-like subdomain
Coatomer/calthrin_app_sub_C SUPERFAMILY Coatomer/calthrin adaptor appendage, C-terminal subdomain
Clathrin_a/b/g-adaptin_app_Ig SMART Clathrin adaptor, alpha/beta/gamma-adaptin, appendage, Ig-like subdomain
Armadillo SMART Armadillo
TBP_dom_sf Gene3D TBP domain superfamily
ARM-type_fold SUPERFAMILY Armadillo-type fold
AP_complex_bsu_1_2_4 PIRSF AP-1/2/4 complex subunit beta
Clathrin/coatomer_adapt-like_N Pfam Clathrin/coatomer adaptor, adaptin-like, N-terminal

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

46 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
Golgi membrane Hs cellular component
signal sequence binding Hs molecular function
transporter activity Hs molecular function
binding Hs molecular function
protein binding Hs molecular function
cytoplasm Hs cellular component
lysosomal membrane Hs cellular component
Golgi apparatus Hs cellular component
trans-Golgi network Hs cellular component
cytosol Hs cellular component
plasma membrane Hs cellular component
clathrin-coated pit Hs cellular component
intracellular protein transport Hs biological process
endocytosis Hs biological process
microtubule-based movement Hs biological process
determination of left/right symmetry Hs biological process
heart development Hs biological process
protein transport Hs biological process
membrane Hs cellular component
vesicle-mediated transport Hs biological process
antigen processing and presentation of exogenous peptide antigen via MHC class II Hs biological process
protein kinase binding Hs molecular function
membrane coat Hs cellular component
clathrin coat Hs cellular component
AP-2 adaptor complex Hs cellular component
clathrin adaptor complex Hs cellular component
clathrin binding Hs molecular function
cytoplasmic vesicle membrane Hs cellular component
clathrin-coated vesicle membrane Hs cellular component
endocytic vesicle membrane Hs cellular component
clathrin-coated endocytic vesicle membrane Hs cellular component
cytoplasmic vesicle Hs cellular component
trans-Golgi network membrane Hs cellular component
clathrin adaptor activity Hs molecular function
aorta development Hs biological process
endolysosome membrane Hs cellular component
intracellular membrane-bounded organelle Hs cellular component
clathrin-coated endocytic vesicle Hs cellular component
positive regulation of endocytosis Hs biological process
ephrin receptor signaling pathway Hs biological process
clathrin coat assembly Hs biological process
Wnt signaling pathway, planar cell polarity pathway Hs biological process
coronary vasculature development Hs biological process
membrane organization Hs biological process
clathrin-dependent endocytosis Hs biological process
negative regulation of neuron death Hs biological process

GO (Blast)

32 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
Golgi membrane Hs cellular component 1328 0.0
signal sequence binding Hs molecular function 1337 0.0
transporter activity Hs molecular function 1328 0.0
binding Hs molecular function 1337 0.0
protein binding Hs molecular function 1337 0.0
cytoplasm Hs cellular component 1337 0.0
lysosomal membrane Hs cellular component 1328 0.0
Golgi apparatus Hs cellular component 1328 0.0
trans-Golgi network Hs cellular component 1337 0.0
cytosol Hs cellular component 1337 0.0
plasma membrane Hs cellular component 1337 0.0
clathrin-coated pit Hs cellular component 1337 0.0
membrane Hs cellular component 1337 0.0
extrinsic component of membrane Hs cellular component 274 1.19e-79
protein kinase binding Hs molecular function 1328 0.0
membrane coat Hs cellular component 1337 0.0
clathrin coat Hs cellular component 1337 0.0
AP-2 adaptor complex Hs cellular component 1337 0.0
AP-4 adaptor complex Hs cellular component 274 1.19e-79
clathrin adaptor complex Hs cellular component 1337 0.0
clathrin binding Hs molecular function 1337 0.0
cytoplasmic vesicle membrane Hs cellular component 1328 0.0
clathrin-coated vesicle membrane Hs cellular component 1328 0.0
endocytic vesicle membrane Hs cellular component 1337 0.0
clathrin-coated endocytic vesicle membrane Hs cellular component 1337 0.0
cytoplasmic vesicle Hs cellular component 1328 0.0
endosome lumen Hs cellular component 274 1.19e-79
trans-Golgi network membrane Hs cellular component 1328 0.0
clathrin adaptor activity Hs molecular function 1337 0.0
endolysosome membrane Hs cellular component 1337 0.0
intracellular membrane-bounded organelle Hs cellular component 1328 0.0
clathrin-coated endocytic vesicle Hs cellular component 1337 0.0

GO (InterProScan)

8 results

GO Term Analysis Type e-value
binding SUPERFAMILY molecular function 3.1E-142
protein binding SMART molecular function 0.012
intracellular protein transport Pfam biological process 3.2E-161
protein transport PIRSF biological process 1.4E-304
vesicle-mediated transport PANTHER biological process 0.0
membrane coat Pfam cellular component 3.2E-161
clathrin adaptor complex SMART cellular component 1.5E-37
clathrin binding PIRSF molecular function 1.4E-304