Login
Help

GENE CARD

Submit your Data

  1. > 
  2. > 

Gene Card

Best human hits

NONO; PSPC1; SFPQ

Species

M.occidentalis

Unique Gene ID

Moocci.g00018306

Gene Model ID

Moocci.CG.ELv1_2.S493241.g18306

Location

S493241:2828..5197

Transcript Models and Sequences

  Moocci.CG.ELv1_2.S493241.g18306.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree
 Click here to see the tree inference method

Gene Annotations

InterPro

6 results

IPR Term Analysis Definition
RBD_domain_sf SUPERFAMILY RNA-binding domain superfamily
RRM_dom SMART RNA recognition motif domain
Nucleotide-bd_a/b_plait_sf Gene3D Nucleotide-binding alpha-beta plait domain superfamily
RRM_dom ProSiteProfiles RNA recognition motif domain
NOPS Pfam NOPS
RRM_dom Pfam RNA recognition motif domain

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

46 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
negative regulation of transcription from RNA polymerase II promoter Hs biological process
alternative mRNA splicing, via spliceosome Hs biological process
mRNA splicing, via spliceosome Hs biological process
double-strand break repair via homologous recombination Hs biological process
chromatin Hs cellular component
transcription regulatory region sequence-specific DNA binding Hs molecular function
RNA polymerase II distal enhancer sequence-specific DNA binding Hs molecular function
core promoter binding Hs molecular function
fibrillar center Hs cellular component
activation of innate immune response Hs biological process
immune system process Hs biological process
nucleic acid binding Hs molecular function
DNA binding Hs molecular function
chromatin binding Hs molecular function
RNA binding Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
nucleolus Hs cellular component
cytoplasm Hs cellular component
DNA repair Hs biological process
DNA recombination Hs biological process
transcription, DNA-templated Hs biological process
regulation of transcription, DNA-templated Hs biological process
mRNA processing Hs biological process
cellular response to DNA damage stimulus Hs biological process
circadian rhythm Hs biological process
RNA splicing Hs biological process
membrane Hs cellular component
nuclear matrix Hs cellular component
nuclear speck Hs cellular component
paraspeckles Hs cellular component
regulation of circadian rhythm Hs biological process
negative regulation of circadian rhythm Hs biological process
identical protein binding Hs molecular function
protein homodimerization activity Hs molecular function
histone deacetylase binding Hs molecular function
transcription regulatory region DNA binding Hs molecular function
innate immune response Hs biological process
negative regulation of transcription, DNA-templated Hs biological process
positive regulation of transcription from RNA polymerase II promoter Hs biological process
rhythmic process Hs biological process
chromosome organization Hs biological process
regulation of cell cycle Hs biological process
histone H3 deacetylation Hs biological process
RNA polymerase II transcription factor complex Hs cellular component

GO (Blast)

23 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
chromatin Hs cellular component 324 7.37e-106
transcription regulatory region sequence-specific DNA binding Hs molecular function 325 1.08e-108
RNA polymerase II distal enhancer sequence-specific DNA binding Hs molecular function 324 7.37e-106
core promoter binding Hs molecular function 325 1.08e-108
fibrillar center Hs cellular component 325 1.08e-108
nucleic acid binding Hs molecular function 325 1.08e-108
DNA binding Hs molecular function 324 7.37e-106
chromatin binding Hs molecular function 324 7.37e-106
RNA binding Hs molecular function 325 1.08e-108
protein binding Hs molecular function 325 1.08e-108
nucleus Hs cellular component 325 1.08e-108
nucleoplasm Hs cellular component 325 1.08e-108
nucleolus Hs cellular component 325 1.08e-108
cytoplasm Hs cellular component 325 1.08e-108
membrane Hs cellular component 296 1.11e-97
nuclear matrix Hs cellular component 325 1.08e-108
nuclear speck Hs cellular component 325 1.08e-108
paraspeckles Hs cellular component 325 1.08e-108
identical protein binding Hs molecular function 296 1.11e-97
protein homodimerization activity Hs molecular function 324 7.37e-106
histone deacetylase binding Hs molecular function 324 7.37e-106
transcription regulatory region DNA binding Hs molecular function 324 7.37e-106
RNA polymerase II transcription factor complex Hs cellular component 324 7.37e-106

GO (InterProScan)

1 result

GO Term Analysis Type e-value
nucleic acid binding SUPERFAMILY molecular function 1.35E-31

Back to Top