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GENE CARD

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Gene Card

Best human hits

RFC2; RFC4; RFC5

Species

M.occidentalis

Unique Gene ID

Moocci.g00018340

Gene Model ID

Moocci.CG.ELv1_2.S493426.g18340

Location

S493426:5956..9234

Transcript Models and Sequences

  Moocci.CG.ELv1_2.S493426.g18340.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
P-loop_NTPase SUPERFAMILY P-loop containing nucleoside triphosphate hydrolase
DNA_pol3_clamp-load_cplx_C SUPERFAMILY DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal
Rep_factorC_C Pfam Replication factor C, C-terminal
ATPase_AAA_core Pfam ATPase, AAA-type, core
AAA+_ATPase SMART AAA+ ATPase domain

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

20 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
nucleotide binding Hs molecular function
DNA binding Hs molecular function
DNA clamp loader activity Hs molecular function
protein binding Hs molecular function
ATP binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
DNA replication factor C complex Hs cellular component
DNA replication Hs biological process
DNA repair Hs biological process
transcription-coupled nucleotide-excision repair Hs biological process
nucleotide-excision repair, DNA incision, 5'-to lesion Hs biological process
nucleotide-excision repair, DNA gap filling Hs biological process
enzyme binding Hs molecular function
translesion synthesis Hs biological process
Ctf18 RFC-like complex Hs cellular component
nucleotide-excision repair, DNA incision Hs biological process
error-prone translesion synthesis Hs biological process
DNA damage response, detection of DNA damage Hs biological process
single-stranded DNA-dependent ATPase activity Hs molecular function

GO (Blast)

11 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nucleotide binding Hs molecular function 481 9.37e-172
DNA binding Hs molecular function 481 9.37e-172
DNA clamp loader activity Hs molecular function 481 9.37e-172
protein binding Hs molecular function 481 9.37e-172
ATP binding Hs molecular function 481 9.37e-172
nucleus Hs cellular component 481 9.37e-172
nucleoplasm Hs cellular component 481 9.37e-172
DNA replication factor C complex Hs cellular component 481 9.37e-172
enzyme binding Hs molecular function 481 9.37e-172
Ctf18 RFC-like complex Hs cellular component 481 9.37e-172
single-stranded DNA-dependent ATPase activity Hs molecular function 481 9.37e-172

GO (InterProScan)

3 results

GO Term Analysis Type e-value
DNA binding SUPERFAMILY molecular function 1.62E-24
ATP binding Pfam molecular function 9.4E-17
DNA replication SUPERFAMILY biological process 1.62E-24