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GENE CARD

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Gene Card

Best human hits

COPA; COPB2; PAFAH1B1

Species

M.occidentalis

Unique Gene ID

Moocci.g00018635

Gene Model ID

Moocci.CG.ELv1_2.S496007.g18635

Location

S496007:909..11140

Transcript Models and Sequences

  Moocci.CG.ELv1_2.S496007.g18635.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

9 results

IPR Term Analysis Definition
WD40_repeat_dom_sf SUPERFAMILY WD40-repeat-containing domain superfamily
WD40_repeat SMART WD40 repeat
WD40/YVTN_repeat-like_dom_sf Gene3D WD40/YVTN repeat-like-containing domain superfamily
G-protein_beta_WD-40_rep PRINTS G-protein beta WD-40 repeat
WD40_repeat ProSiteProfiles WD40 repeat
Coatomer_WD-assoc_reg Pfam Coatomer, WD associated region
COPB2 PIRSF Coatomer beta' subunit (COPB2)
WD40_repeat_dom ProSiteProfiles WD40-repeat-containing domain
WD40_repeat Pfam WD40 repeat

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

20 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
Golgi membrane Hs cellular component
structural molecule activity Hs molecular function
protein binding Hs molecular function
cytoplasm Hs cellular component
endoplasmic reticulum membrane Hs cellular component
Golgi apparatus Hs cellular component
cytosol Hs cellular component
intracellular protein transport Hs biological process
ER to Golgi vesicle-mediated transport Hs biological process
retrograde vesicle-mediated transport, Golgi to ER Hs biological process
intra-Golgi vesicle-mediated transport Hs biological process
protein transport Hs biological process
membrane Hs cellular component
vesicle-mediated transport Hs biological process
membrane coat Hs cellular component
COPI vesicle coat Hs cellular component
transport vesicle Hs cellular component
COPI-coated vesicle membrane Hs cellular component
cytoplasmic vesicle Hs cellular component
toxin transport Hs biological process

GO (Blast)

51 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
Golgi membrane Hs cellular component 1294 0.0
astral microtubule Hs cellular component 102 6.44e-23
kinetochore Hs cellular component 102 6.44e-23
phospholipase A2 activity Hs molecular function 102 6.44e-23
hormone activity Hs molecular function 203 3.38e-54
structural molecule activity Hs molecular function 1294 0.0
protein binding Hs molecular function 1294 0.0
extracellular region Hs cellular component 203 3.38e-54
extracellular space Hs cellular component 203 3.38e-54
nucleus Hs cellular component 102 6.44e-23
nuclear envelope Hs cellular component 102 6.44e-23
cytoplasm Hs cellular component 1294 0.0
endoplasmic reticulum membrane Hs cellular component 1294 0.0
Golgi apparatus Hs cellular component 1294 0.0
centrosome Hs cellular component 102 6.44e-23
microtubule organizing center Hs cellular component 102 6.44e-23
spindle Hs cellular component 102 6.44e-23
cytosol Hs cellular component 1294 0.0
cytoskeleton Hs cellular component 102 6.44e-23
kinesin complex Hs cellular component 102 6.44e-23
microtubule Hs cellular component 102 6.44e-23
microtubule associated complex Hs cellular component 102 6.44e-23
cell cortex Hs cellular component 102 6.44e-23
microtubule binding Hs molecular function 102 6.44e-23
heparin binding Hs molecular function 102 6.44e-23
microtubule cytoskeleton Hs cellular component 102 6.44e-23
membrane Hs cellular component 1294 0.0
membrane coat Hs cellular component 1294 0.0
COPI vesicle coat Hs cellular component 1294 0.0
transport vesicle Hs cellular component 1294 0.0
axon Hs cellular component 102 6.44e-23
growth cone Hs cellular component 102 6.44e-23
COPI-coated vesicle membrane Hs cellular component 1294 0.0
cell leading edge Hs cellular component 102 6.44e-23
cytoplasmic vesicle Hs cellular component 1294 0.0
motile cilium Hs cellular component 102 6.44e-23
nuclear membrane Hs cellular component 102 6.44e-23
vesicle Hs cellular component 102 6.44e-23
stereocilium Hs cellular component 102 6.44e-23
dynactin binding Hs molecular function 102 6.44e-23
protein homodimerization activity Hs molecular function 102 6.44e-23
neuron projection Hs cellular component 102 6.44e-23
neuronal cell body Hs cellular component 102 6.44e-23
phospholipase binding Hs molecular function 102 6.44e-23
dynein intermediate chain binding Hs molecular function 102 6.44e-23
perinuclear region of cytoplasm Hs cellular component 102 6.44e-23
phosphoprotein binding Hs molecular function 102 6.44e-23
extracellular exosome Hs cellular component 203 3.38e-54
dynein complex binding Hs molecular function 102 6.44e-23
central region of growth cone Hs cellular component 102 6.44e-23
axon cytoplasm Hs cellular component 102 6.44e-23

GO (InterProScan)

5 results

GO Term Analysis Type e-value
structural molecule activity Pfam molecular function 2.1E-169
protein binding Gene3D molecular function 3.1E-86
intracellular protein transport Pfam biological process 2.1E-169
vesicle-mediated transport Pfam biological process 2.1E-169
membrane coat Pfam cellular component 2.1E-169