Aniseed - Gene card

Pub 'PMID:15950616' >
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Gene Card

Best human hits

TBX2; TBX5; TBX6

Species

M.occidentalis

Unique Gene ID

Moocci.g00018857

Gene Model ID

Moocci.CG.ELv1_2.S497697.g18857

Location

S497697:4172..5131

Transcript Models and Sequences

Moocci.CG.ELv1_2.S497697.g18857.01.t

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

8 results

IPR Term	Analysis	Definition
TF_T-box_CS	ProSitePatterns	Transcription factor, T-box, conserved site
TF_T-box	PRINTS	Transcription factor, T-box
T-box_sf	Gene3D	T-box superfamily
TF_T-box	PANTHER	Transcription factor, T-box
TF_T-box	Pfam	Transcription factor, T-box
p53-like_TF_DNA-bd	SUPERFAMILY	p53-like transcription factor, DNA-binding
TF_T-box	ProSiteProfiles	Transcription factor, T-box
TF_T-box	SMART	Transcription factor, T-box

GOSlim

No result

GO Term	Annotation Origin	Type

GO (Orthology)

No result

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type

GO (Blast)

20 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
RNA polymerase II regulatory region sequence-specific DNA binding	Hs	molecular function	150	1.56e-42
RNA polymerase II core promoter proximal region sequence-specific DNA binding	Hs	molecular function	152	1.67e-42
RNA polymerase II distal enhancer sequence-specific DNA binding	Hs	molecular function	152	4.38e-44
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Hs	molecular function	152	4.38e-44
transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding	Hs	molecular function	152	1.67e-42
RNA polymerase II transcription factor binding	Hs	molecular function	152	4.38e-44
RNA polymerase II activating transcription factor binding	Hs	molecular function	152	4.38e-44
transcriptional repressor activity, RNA polymerase II transcription factor binding	Hs	molecular function	152	4.38e-44
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	Hs	molecular function	150	1.56e-42
DNA binding	Hs	molecular function	152	4.38e-44
transcription factor activity, sequence-specific DNA binding	Hs	molecular function	152	4.38e-44
protein binding	Hs	molecular function	152	4.38e-44
nucleus	Hs	cellular component	152	4.38e-44
nucleoplasm	Hs	cellular component	150	1.56e-42
transcription factor complex	Hs	cellular component	152	1.67e-42
cytoplasm	Hs	cellular component	150	1.56e-42
transcription factor binding	Hs	molecular function	150	1.56e-42
macromolecular complex	Hs	cellular component	150	1.56e-42
protein-DNA complex	Hs	cellular component	150	1.56e-42
sequence-specific DNA binding	Hs	molecular function	152	1.67e-42

GO (InterProScan)

3 results

GO Term	Analysis	Type	e-value
transcription factor activity, sequence-specific DNA binding	PANTHER	molecular function	6.8E-78
nucleus	PANTHER	cellular component	6.8E-78
regulation of transcription, DNA-templated	PANTHER	biological process	6.8E-78