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GENE CARD

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Gene Card

Best human hits

FTSJ1; FTSJ3; MRM2

Species

M.occidentalis

Unique Gene ID

Moocci.g00019446

Gene Model ID

Moocci.CG.ELv1_2.S514178.g19446

Location

S514178:21208..24100

Transcript Models and Sequences

  Moocci.CG.ELv1_2.S514178.g19446.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term Analysis Definition
rRNA-MeTfrase_E Hamap Ribosomal RNA large subunit methyltransferase E
rRNA-MeTfrase_E PIRSF Ribosomal RNA large subunit methyltransferase E
rRNA_MeTrfase_FtsJ_dom Pfam Ribosomal RNA methyltransferase FtsJ domain
SAM-dependent_MTases SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferase

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

11 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
RNA methylation Hs biological process
nucleolus Hs cellular component
mitochondrion Hs cellular component
mitochondrial matrix Hs cellular component
rRNA processing Hs biological process
methyltransferase activity Hs molecular function
cell proliferation Hs biological process
rRNA (uridine-2'-O-)-methyltransferase activity Hs molecular function
transferase activity Hs molecular function
rRNA methylation Hs biological process
methylation Hs biological process

GO (Blast)

17 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
RNA binding Hs molecular function 80.9 1.46e-17
protein binding Hs molecular function 80.9 1.46e-17
nucleus Hs cellular component 80.9 1.46e-17
nucleolus Hs cellular component 163 5.74e-50
cytoplasm Hs cellular component 119 2.57e-32
mitochondrion Hs cellular component 163 5.74e-50
mitochondrial matrix Hs cellular component 163 5.74e-50
cytosol Hs cellular component 119 2.57e-32
methyltransferase activity Hs molecular function 163 5.74e-50
tRNA methyltransferase activity Hs molecular function 119 2.57e-32
rRNA methyltransferase activity Hs molecular function 80.9 1.46e-17
rRNA (uridine-2'-O-)-methyltransferase activity Hs molecular function 163 5.74e-50
tRNA (guanosine-2'-O-)-methyltransferase activity Hs molecular function 119 2.57e-32
rRNA (guanine) methyltransferase activity Hs molecular function 80.9 1.46e-17
transferase activity Hs molecular function 163 5.74e-50
preribosome, large subunit precursor Hs cellular component 80.9 1.46e-17
tRNA (cytosine-2'-O-)-methyltransferase activity Hs molecular function 119 2.57e-32

GO (InterProScan)

3 results

GO Term Analysis Type e-value
RNA methylation PIRSF biological process 6.4E-62
methyltransferase activity PIRSF molecular function 6.4E-62
methylation Pfam biological process 2.5E-52