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GENE CARD

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Gene Card

Best human hits

SNAI1; SNAI2; SNAI3

Species

M.occidentalis

Unique Gene ID

Moocci.g00019802

Gene Model ID

Moocci.CG.ELv1_2.S523753.g19802

Location

S523753:13654..16317

Transcript Models and Sequences

  Moocci.CG.ELv1_2.S523753.g19802.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term Analysis Definition
Znf_C2H2_type ProSiteProfiles Zinc finger C2H2-type
Znf_C2H2_sf SUPERFAMILY Zinc finger C2H2 superfamily
Znf_C2H2_type ProSitePatterns Zinc finger C2H2-type
Znf_C2H2_type SMART Zinc finger C2H2-type

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

23 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nuclear chromatin Hs cellular component 211 9.58e-65
RNA polymerase II regulatory region sequence-specific DNA binding Hs molecular function 203 2.47e-61
RNA polymerase II core promoter proximal region sequence-specific DNA binding Hs molecular function 203 2.47e-61
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function 211 9.58e-65
transcription factor activity, RNA polymerase II core promoter proximal region sequence-specific binding Hs molecular function 203 2.47e-61
transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding Hs molecular function 211 9.58e-65
transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific binding Hs molecular function 203 2.47e-61
nucleic acid binding Hs molecular function 211 9.58e-65
DNA binding Hs molecular function 211 9.58e-65
chromatin binding Hs molecular function 211 9.58e-65
transcription factor activity, sequence-specific DNA binding Hs molecular function 203 2.47e-61
transcription factor activity, RNA polymerase II distal enhancer sequence-specific binding Hs molecular function 211 9.58e-65
copper ion binding Hs molecular function 203 2.47e-61
protein binding Hs molecular function 211 9.58e-65
nucleus Hs cellular component 211 9.58e-65
nucleoplasm Hs cellular component 211 9.58e-65
transcription factor complex Hs cellular component 203 2.47e-61
pericentric heterochromatin Hs cellular component 184 1.21e-54
cytoplasm Hs cellular component 211 9.58e-65
cytosol Hs cellular component 184 1.21e-54
kinase binding Hs molecular function 184 1.21e-54
sequence-specific DNA binding Hs molecular function 211 9.58e-65
metal ion binding Hs molecular function 211 9.58e-65

GO (InterProScan)

1 result

GO Term Analysis Type e-value
nucleic acid binding SMART molecular function 1.9E-4