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GENE CARD

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Gene Card

Best human hits

GMDS; TGDS; UXS1

Species

M.occidentalis

Unique Gene ID

Moocci.g00021397

Gene Model ID

Moocci.CG.ELv1_2.S551517.g21397

Location

S551517:6020..9818

Transcript Models and Sequences

  Moocci.CG.ELv1_2.S551517.g21397.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
GDP_Man_deHydtase PANTHER GDP-mannose 4,6-dehydratase
GDP_Man_deHydtase TIGRFAM GDP-mannose 4,6-dehydratase
GDP_Man_deHydtase Hamap GDP-mannose 4,6-dehydratase
NAD(P)-bd_dom Pfam NAD(P)-binding domain
NAD(P)-bd_dom_sf SUPERFAMILY NAD(P)-binding domain superfamily

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

11 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
protein binding Hs molecular function
cytoplasm Hs cellular component
cytosol Hs cellular component
Notch signaling pathway Hs biological process
GDP-mannose 4,6-dehydratase activity Hs molecular function
lyase activity Hs molecular function
GDP-mannose metabolic process Hs biological process
'de novo' GDP-L-fucose biosynthetic process Hs biological process
identical protein binding Hs molecular function
extracellular exosome Hs cellular component
NADP+ binding Hs molecular function

GO (Blast)

20 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
catalytic activity Hs molecular function 52.0 2.17e-07
protein binding Hs molecular function 513 0.0
cytoplasm Hs cellular component 513 0.0
mitochondrion Hs cellular component 52.0 2.17e-07
Golgi apparatus Hs cellular component 52.0 2.17e-07
cytosol Hs cellular component 513 0.0
GDP-mannose 4,6-dehydratase activity Hs molecular function 513 0.0
dTDP-glucose 4,6-dehydratase activity Hs molecular function 57.0 4.96e-09
membrane Hs cellular component 52.0 2.17e-07
integral component of membrane Hs cellular component 52.0 2.17e-07
lyase activity Hs molecular function 513 0.0
carboxy-lyase activity Hs molecular function 52.0 2.17e-07
Golgi cisterna membrane Hs cellular component 52.0 2.17e-07
identical protein binding Hs molecular function 513 0.0
protein homodimerization activity Hs molecular function 52.0 2.17e-07
UDP-glucuronate decarboxylase activity Hs molecular function 52.0 2.17e-07
coenzyme binding Hs molecular function 52.0 2.17e-07
extracellular exosome Hs cellular component 513 0.0
NADP+ binding Hs molecular function 513 0.0
NAD+ binding Hs molecular function 52.0 2.17e-07

GO (InterProScan)

2 results

GO Term Analysis Type e-value
GDP-mannose 4,6-dehydratase activity TIGRFAM molecular function 2.3E-174
GDP-mannose metabolic process TIGRFAM biological process 2.3E-174