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GENE CARD

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Gene Card

Best human hits

IRF1; IRF4; IRF5

Species

M.occidentalis

Unique Gene ID

Moocci.g00021548

Gene Model ID

Moocci.CG.ELv1_2.S554873.g21548

Location

S554873:367..3317

Transcript Models and Sequences

  Moocci.CG.ELv1_2.S554873.g21548.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

9 results

IPR Term Analysis Definition
Interferon_reg_fact_DNA-bd_dom ProSiteProfiles Interferon regulatory factor DNA-binding domain
SMAD_FHA_dom_sf SUPERFAMILY SMAD/FHA domain superfamily
Interferon_reg_fact_DNA-bd_dom PANTHER Interferon regulatory factor DNA-binding domain
Interferon_reg_fact_DNA-bd_dom Pfam Interferon regulatory factor DNA-binding domain
WH-like_DNA-bd_sf Gene3D Winged helix-like DNA-binding domain superfamily
SMAD-like_dom_sf Gene3D SMAD-like domain superfamily
WH_DNA-bd_sf SUPERFAMILY Winged helix DNA-binding domain superfamily
Interferon_reg_factor-3 SMART Interferon regulatory factor-3
Interferon_reg_factor-3 Pfam Interferon regulatory factor-3

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

19 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nuclear nucleosome Hs cellular component 41.6 6.90e-04
nuclear chromatin Hs cellular component 47.0 1.29e-05
RNA polymerase II core promoter proximal region sequence-specific DNA binding Hs molecular function 47.0 1.29e-05
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function 47.0 1.29e-05
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding Hs molecular function 47.0 1.29e-05
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding Hs molecular function 41.2 0.001
DNA binding Hs molecular function 47.0 1.29e-05
transcription factor activity, sequence-specific DNA binding Hs molecular function 47.0 1.29e-05
protein binding Hs molecular function 47.0 1.29e-05
nucleus Hs cellular component 47.0 1.29e-05
nucleoplasm Hs cellular component 47.0 1.29e-05
cytoplasm Hs cellular component 47.0 1.29e-05
cytosol Hs cellular component 47.0 1.29e-05
transcription factor binding Hs molecular function 41.6 6.90e-04
membrane Hs cellular component 41.6 6.90e-04
protein-lysine N-methyltransferase activity Hs molecular function 41.6 6.90e-04
identical protein binding Hs molecular function 41.2 0.001
sequence-specific DNA binding Hs molecular function 47.0 1.29e-05
transcription regulatory region DNA binding Hs molecular function 47.0 1.29e-05

GO (InterProScan)

4 results

GO Term Analysis Type e-value
transcription factor activity, sequence-specific DNA binding Pfam molecular function 6.8E-18
protein binding SUPERFAMILY molecular function 4.06E-10
regulation of transcription, DNA-templated Pfam biological process 6.8E-18
transcription regulatory region DNA binding PANTHER molecular function 2.0E-36