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GENE CARD

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Gene Card

Best human hits

COL24A1; COL4A6; COL7A1

Species

M.occidentalis

Unique Gene ID

Moocci.g00021808

Gene Model ID

Moocci.CG.ELv1_2.S559692.g21808

Location

S559692:5513..18297

Transcript Models and Sequences

  Moocci.CG.ELv1_2.S559692.g21808.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

1 result

IPR Term Analysis Definition
Collagen Pfam Collagen triple helix repeat

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

26 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
structural molecule activity Hs molecular function
extracellular matrix structural constituent Hs molecular function
protein binding Hs molecular function
extracellular region Hs cellular component
proteinaceous extracellular matrix Hs cellular component
collagen trimer Hs cellular component
collagen type IV trimer Hs cellular component
basement membrane Hs cellular component
extracellular space Hs cellular component
endoplasmic reticulum lumen Hs cellular component
cell adhesion Hs biological process
extracellular matrix organization Hs biological process
collagen catabolic process Hs biological process
extracellular matrix Hs cellular component
endodermal cell differentiation Hs biological process
collagen-activated tyrosine kinase receptor signaling pathway Hs biological process
cellular response to amino acid stimulus Hs biological process
angiogenesis Hs biological process
basal lamina Hs cellular component
transcription, DNA-templated Hs biological process
aging Hs biological process
response to activity Hs biological process
negative regulation of angiogenesis Hs biological process
glomerular basement membrane development Hs biological process
extracellular exosome Hs cellular component
cellular response to transforming growth factor beta stimulus Hs biological process

GO (Blast)

18 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
Golgi membrane Hs cellular component 236 3.90e-63
serine-type endopeptidase inhibitor activity Hs molecular function 236 3.90e-63
structural molecule activity Hs molecular function 300 3.64e-84
extracellular matrix structural constituent Hs molecular function 300 3.64e-84
protein binding Hs molecular function 271 7.94e-75
extracellular region Hs cellular component 300 3.64e-84
proteinaceous extracellular matrix Hs cellular component 300 3.64e-84
collagen trimer Hs cellular component 300 3.64e-84
collagen type IV trimer Hs cellular component 300 3.64e-84
collagen type VII trimer Hs cellular component 236 3.90e-63
basement membrane Hs cellular component 300 3.64e-84
extracellular space Hs cellular component 236 3.90e-63
endoplasmic reticulum lumen Hs cellular component 300 3.64e-84
COPII-coated ER to Golgi transport vesicle Hs cellular component 236 3.90e-63
peptidase inhibitor activity Hs molecular function 236 3.90e-63
extracellular matrix Hs cellular component 236 3.90e-63
endoplasmic reticulum-Golgi intermediate compartment membrane Hs cellular component 236 3.90e-63
identical protein binding Hs molecular function 236 3.90e-63

GO (InterProScan)

No result

GO Term Analysis Type e-value