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GENE CARD

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Gene Card

Best human hits

SMNDC1

Species

M.occidentalis

Unique Gene ID

Moocci.g00022509

Gene Model ID

Moocci.CG.ELv1_2.S571414.g22509

Location

S571414:3760..8902

Transcript Models and Sequences

  Moocci.CG.ELv1_2.S571414.g22509.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

1 result

IPR Term Analysis Definition

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

13 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
RNA splicing, via transesterification reactions Hs biological process
mRNA splicing, via spliceosome Hs biological process
RNA binding Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
spliceosomal complex Hs cellular component
cytoplasm Hs cellular component
mRNA processing Hs biological process
apoptotic process Hs biological process
RNA splicing Hs biological process
Cajal body Hs cellular component
nuclear speck Hs cellular component

GO (Blast)

8 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
RNA binding Hs molecular function 118 5.37e-33
protein binding Hs molecular function 118 5.37e-33
nucleus Hs cellular component 118 5.37e-33
nucleoplasm Hs cellular component 118 5.37e-33
spliceosomal complex Hs cellular component 118 5.37e-33
cytoplasm Hs cellular component 118 5.37e-33
Cajal body Hs cellular component 118 5.37e-33
nuclear speck Hs cellular component 118 5.37e-33

GO (InterProScan)

No result

GO Term Analysis Type e-value