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GENE CARD

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Gene Card

Best human hits

TRPC1; TRPC4; TRPC5

Species

M.occidentalis

Unique Gene ID

Moocci.g00023440

Gene Model ID

Moocci.CG.ELv1_2.S584804.g23440

Location

S584804:24520..32007

Transcript Models and Sequences

  Moocci.CG.ELv1_2.S584804.g23440.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term Analysis Definition
Ankyrin_rpt SMART Ankyrin repeat
Ankyrin_rpt-contain_sf Gene3D Ankyrin repeat-containing domain superfamily
TRPC_channel PANTHER Transient receptor potential channel, canonical
Ion_trans_dom Pfam Ion transport domain
Ankyrin_rpt-contain_dom CDD Ankyrin repeat-containing domain
Ankyrin_rpt-contain_sf SUPERFAMILY Ankyrin repeat-containing domain superfamily

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

28 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
actin binding Hs molecular function 104 7.32e-23
ion channel activity Hs molecular function 104 7.32e-23
cation channel activity Hs molecular function 93.6 1.51e-19
calcium channel activity Hs molecular function 104 7.32e-23
protein binding Hs molecular function 104 7.32e-23
cytoplasm Hs cellular component 104 7.32e-23
plasma membrane Hs cellular component 104 7.32e-23
integral component of plasma membrane Hs cellular component 104 7.32e-23
caveola Hs cellular component 89.7 3.33e-18
cell-cell junction Hs cellular component 89.7 3.33e-18
beta-catenin binding Hs molecular function 89.7 3.33e-18
cell surface Hs cellular component 89.7 3.33e-18
store-operated calcium channel activity Hs molecular function 104 7.32e-23
membrane Hs cellular component 104 7.32e-23
integral component of membrane Hs cellular component 104 7.32e-23
basolateral plasma membrane Hs cellular component 89.7 3.33e-18
clathrin binding Hs molecular function 104 7.32e-23
dendrite Hs cellular component 104 7.32e-23
growth cone Hs cellular component 104 7.32e-23
cortical cytoskeleton Hs cellular component 89.7 3.33e-18
calcium channel complex Hs cellular component 104 7.32e-23
actinin binding Hs molecular function 104 7.32e-23
neuronal cell body Hs cellular component 104 7.32e-23
receptor complex Hs cellular component 93.6 1.51e-19
membrane raft Hs cellular component 104 7.32e-23
cadherin binding Hs molecular function 89.7 3.33e-18
ATPase binding Hs molecular function 104 7.32e-23
inositol 1,4,5 trisphosphate binding Hs molecular function 104 7.32e-23

GO (InterProScan)

7 results

GO Term Analysis Type e-value
ion channel activity Pfam molecular function 6.7E-8
calcium channel activity PANTHER molecular function 1.3E-94
protein binding SMART molecular function 1.1
ion transport Pfam biological process 6.7E-8
membrane PANTHER cellular component 1.3E-94
transmembrane transport Pfam biological process 6.7E-8
calcium ion transmembrane transport PANTHER biological process 1.3E-94