Login
Help

GENE CARD

Submit your Data

  1. Gene 'Moocci.CG.ELv1_2.S60...'

Gene Card

Best human hits

BRIX1; IMP4; RPF2

Species

M.occidentalis

Unique Gene ID

Moocci.g00025281

Gene Model ID

Moocci.CG.ELv1_2.S608043.g25281

Location

S608043:3267..9413

Transcript Models and Sequences

  Moocci.CG.ELv1_2.S608043.g25281.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

4 results

IPR Term Analysis Definition
BRX1 PANTHER Ribosome biogenesis protein BRX1
Brix SMART Brix domain
Brix Pfam Brix domain
Brix ProSiteProfiles Brix domain

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

5 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
ribosomal large subunit assembly Hs biological process
RNA binding Hs molecular function
nucleus Hs cellular component
nucleolus Hs cellular component
ribosome biogenesis Hs biological process

GO (Blast)

13 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
fibrillar center Hs cellular component 41.6 3.21e-04
RNA binding Hs molecular function 342 1.53e-117
protein binding Hs molecular function 41.6 3.21e-04
nucleus Hs cellular component 342 1.53e-117
nucleoplasm Hs cellular component 41.6 3.21e-04
nucleolus Hs cellular component 342 1.53e-117
5S rRNA binding Hs molecular function 48.5 1.59e-06
rRNA binding Hs molecular function 48.5 1.59e-06
snoRNA binding Hs molecular function 41.6 3.21e-04
intracellular ribonucleoprotein complex Hs cellular component 41.6 3.21e-04
small-subunit processome Hs cellular component 41.6 3.21e-04
Mpp10 complex Hs cellular component 41.6 3.21e-04
rRNA primary transcript binding Hs molecular function 41.6 3.21e-04

GO (InterProScan)

No result

GO Term Analysis Type e-value