Aniseed - Gene card

Gene Card

Best human hits

ITGB1; ITGB2; ITGB7

Species

M.occidentalis

Unique Gene ID

Moocci.g00026808

Gene Model ID

Moocci.CG.ELv1_2.S625464.g26808

Location

S625464:282..12831

Transcript Models and Sequences

Moocci.CG.ELv1_2.S625464.g26808.01.t

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

9 results

IPR Term	Analysis	Definition
Integrin_bsu_cyt_dom	Pfam	Integrin beta subunit, cytoplasmic domain
Integrin_bsu_VWA	Pfam	Integrin beta subunit, VWA domain
vWFA_dom_sf	SUPERFAMILY	von Willebrand factor A-like domain superfamily
Integrin_bsu	ProSitePatterns	Integrin beta subunit
Integrin_bsu_VWA	SMART	Integrin beta subunit, VWA domain
Integrin_bsu_cyt_dom	SMART	Integrin beta subunit, cytoplasmic domain
Integrin_bsu	PANTHER	Integrin beta subunit
Integrin_bsu	PRINTS	Integrin beta subunit
Integrin_bsu	PIRSF	Integrin beta subunit

GOSlim

No result

GO Term	Annotation Origin	Type

GO (Orthology)

No result

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type

GO (Blast)

68 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
amyloid-beta binding	Hs	molecular function	341	5.27e-106
virus receptor activity	Hs	molecular function	355	5.82e-111
ruffle	Hs	cellular component	355	5.82e-111
complement component C3b binding	Hs	molecular function	341	5.27e-106
fibronectin binding	Hs	molecular function	355	5.82e-111
protease binding	Hs	molecular function	355	5.82e-111
actin binding	Hs	molecular function	355	5.82e-111
receptor activity	Hs	molecular function	355	5.82e-111
integrin binding	Hs	molecular function	355	5.82e-111
protein binding	Hs	molecular function	355	5.82e-111
cytoplasm	Hs	cellular component	355	5.82e-111
endosome	Hs	cellular component	355	5.82e-111
plasma membrane	Hs	cellular component	355	5.82e-111
focal adhesion	Hs	cellular component	355	5.82e-111
integrin complex	Hs	cellular component	355	5.82e-111
external side of plasma membrane	Hs	cellular component	355	5.82e-111
cell surface	Hs	cellular component	355	5.82e-111
intercalated disc	Hs	cellular component	355	5.82e-111
coreceptor activity	Hs	molecular function	355	5.82e-111
membrane	Hs	cellular component	355	5.82e-111
integral component of membrane	Hs	cellular component	355	5.82e-111
protein kinase binding	Hs	molecular function	341	5.27e-106
C-X3-C chemokine binding	Hs	molecular function	355	5.82e-111
lamellipodium	Hs	cellular component	355	5.82e-111
cell junction	Hs	cellular component	355	5.82e-111
filopodium	Hs	cellular component	355	5.82e-111
ICAM-3 receptor activity	Hs	molecular function	341	5.27e-106
heat shock protein binding	Hs	molecular function	341	5.27e-106
cytoplasmic vesicle	Hs	cellular component	355	5.82e-111
neuromuscular junction	Hs	cellular component	355	5.82e-111
cleavage furrow	Hs	cellular component	355	5.82e-111
ruffle membrane	Hs	cellular component	355	5.82e-111
integrin alpha1-beta1 complex	Hs	cellular component	355	5.82e-111
integrin alpha2-beta1 complex	Hs	cellular component	355	5.82e-111
integrin alpha3-beta1 complex	Hs	cellular component	355	5.82e-111
integrin alpha4-beta7 complex	Hs	cellular component	347	3.38e-108
integrin alpha7-beta1 complex	Hs	cellular component	355	5.82e-111
integrin alpha8-beta1 complex	Hs	cellular component	355	5.82e-111
integrin alpha10-beta1 complex	Hs	cellular component	355	5.82e-111
integrin alpha11-beta1 complex	Hs	cellular component	355	5.82e-111
integrin alphaL-beta2 complex	Hs	cellular component	341	5.27e-106
integrin alphaM-beta2 complex	Hs	cellular component	341	5.27e-106
specific granule membrane	Hs	cellular component	341	5.27e-106
myelin sheath abaxonal region	Hs	cellular component	355	5.82e-111
sarcolemma	Hs	cellular component	355	5.82e-111
melanosome	Hs	cellular component	355	5.82e-111
cell projection	Hs	cellular component	355	5.82e-111
dendritic spine	Hs	cellular component	355	5.82e-111
receptor complex	Hs	cellular component	355	5.82e-111
laminin binding	Hs	molecular function	355	5.82e-111
plasma membrane raft	Hs	cellular component	341	5.27e-106
macromolecular complex binding	Hs	molecular function	355	5.82e-111
membrane raft	Hs	cellular component	355	5.82e-111
synapse	Hs	cellular component	355	5.82e-111
cadherin binding	Hs	molecular function	355	5.82e-111
metal ion binding	Hs	molecular function	355	5.82e-111
protein heterodimerization activity	Hs	molecular function	355	5.82e-111
perinuclear region of cytoplasm	Hs	cellular component	355	5.82e-111
cell adhesion molecule binding	Hs	molecular function	355	5.82e-111
recycling endosome	Hs	cellular component	355	5.82e-111
extracellular exosome	Hs	cellular component	355	5.82e-111
tertiary granule membrane	Hs	cellular component	341	5.27e-106
invadopodium membrane	Hs	cellular component	355	5.82e-111
synaptic membrane	Hs	cellular component	355	5.82e-111
collagen binding involved in cell-matrix adhesion	Hs	molecular function	355	5.82e-111
cytoplasmic region	Hs	cellular component	341	5.27e-106
ficolin-1-rich granule membrane	Hs	cellular component	341	5.27e-106
extracellular vesicle	Hs	cellular component	341	5.27e-106

GO (InterProScan)

No result

GO Term	Analysis	Type	e-value