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GENE CARD

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Gene Card

Best human hits

SNF8

Species

M.occidentalis

Unique Gene ID

Moocci.g00027003

Gene Model ID

Moocci.CG.ELv1_2.S627462.g27003

Location

S627462:14721..18270

Transcript Models and Sequences

  Moocci.CG.ELv1_2.S627462.g27003.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term Analysis Definition
WH-like_DNA-bd_sf Gene3D Winged helix-like DNA-binding domain superfamily
WH_DNA-bd_sf SUPERFAMILY Winged helix DNA-binding domain superfamily
ESCRT-2_cplx_Snf8 PANTHER ESCRT-2 complex, Snf8
ESCRT-2_cplx_Snf8 PIRSF ESCRT-2 complex, Snf8

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

37 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
ESCRT II complex Hs cellular component
protein binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
transcription factor complex Hs cellular component
cytoplasm Hs cellular component
endosome Hs cellular component
cytosol Hs cellular component
plasma membrane Hs cellular component
transcription, DNA-templated Hs biological process
regulation of transcription, DNA-templated Hs biological process
regulation of transcription from RNA polymerase II promoter Hs biological process
protein C-terminus binding Hs molecular function
transcription factor binding Hs molecular function
endosome membrane Hs cellular component
positive regulation of gene expression Hs biological process
regulation of multivesicular body size involved in endosome transport Hs biological process
protein transport Hs biological process
membrane Hs cellular component
endosomal transport Hs biological process
macroautophagy Hs biological process
channel regulator activity Hs molecular function
late endosome membrane Hs cellular component
endocytic recycling Hs biological process
multivesicular body assembly Hs biological process
regulation of protein catabolic process Hs biological process
protein homodimerization activity Hs molecular function
protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway Hs biological process
early endosome to late endosome transport Hs biological process
positive regulation of protein catabolic process Hs biological process
protein N-terminus binding Hs molecular function
perinuclear region of cytoplasm Hs cellular component
recycling endosome Hs cellular component
regulation of protein complex stability Hs biological process
regulation of molecular function Hs biological process
extracellular exosome Hs cellular component
multivesicular body sorting pathway Hs biological process

GO (Blast)

20 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
ESCRT II complex Hs cellular component 314 4.05e-109
protein binding Hs molecular function 314 4.05e-109
nucleus Hs cellular component 314 4.05e-109
nucleoplasm Hs cellular component 314 4.05e-109
transcription factor complex Hs cellular component 314 4.05e-109
cytoplasm Hs cellular component 314 4.05e-109
endosome Hs cellular component 314 4.05e-109
cytosol Hs cellular component 314 4.05e-109
plasma membrane Hs cellular component 314 4.05e-109
protein C-terminus binding Hs molecular function 314 4.05e-109
transcription factor binding Hs molecular function 314 4.05e-109
endosome membrane Hs cellular component 314 4.05e-109
membrane Hs cellular component 314 4.05e-109
channel regulator activity Hs molecular function 314 4.05e-109
late endosome membrane Hs cellular component 314 4.05e-109
protein homodimerization activity Hs molecular function 314 4.05e-109
protein N-terminus binding Hs molecular function 314 4.05e-109
perinuclear region of cytoplasm Hs cellular component 314 4.05e-109
recycling endosome Hs cellular component 314 4.05e-109
extracellular exosome Hs cellular component 314 4.05e-109

GO (InterProScan)

2 results

GO Term Analysis Type e-value
ESCRT II complex PANTHER cellular component 9.5E-101
multivesicular body sorting pathway PANTHER biological process 9.5E-101

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