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GENE CARD

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  1. Gene 'Moocci.CG.ELv1_2.S63...'

Gene Card

Best human hits

SNRNP40; WDR5; WDR5B

Species

M.occidentalis

Unique Gene ID

Moocci.g00027744

Gene Model ID

Moocci.CG.ELv1_2.S633426.g27744

Location

S633426:288..3083

Transcript Models and Sequences

  Moocci.CG.ELv1_2.S633426.g27744.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

8 results

IPR Term Analysis Definition
WD40_repeat SMART WD40 repeat
WD40_repeat ProSiteProfiles WD40 repeat
WD40_repeat_CS ProSitePatterns WD40 repeat, conserved site
G-protein_beta_WD-40_rep PRINTS G-protein beta WD-40 repeat
WD40/YVTN_repeat-like_dom_sf Gene3D WD40/YVTN repeat-like-containing domain superfamily
WD40_repeat_dom_sf SUPERFAMILY WD40-repeat-containing domain superfamily
WD40_repeat_dom ProSiteProfiles WD40-repeat-containing domain
WD40_repeat Pfam WD40 repeat

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

19 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
RNA splicing, via transesterification reactions Hs biological process
mRNA splicing, via spliceosome Hs biological process
RNA binding Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
spliceosomal complex Hs cellular component
U5 snRNP Hs cellular component
small nucleolar ribonucleoprotein complex Hs cellular component
cytosol Hs cellular component
RNA processing Hs biological process
mRNA processing Hs biological process
RNA splicing Hs biological process
membrane Hs cellular component
integral component of membrane Hs cellular component
nuclear speck Hs cellular component
U2-type catalytic step 2 spliceosome Hs cellular component
precatalytic spliceosome Hs cellular component
catalytic step 2 spliceosome Hs cellular component

GO (Blast)

28 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
histone acetyltransferase complex Hs cellular component 135 1.32e-37
RNA binding Hs molecular function 413 1.42e-145
protein binding Hs molecular function 413 1.42e-145
intracellular Hs cellular component 135 1.32e-37
nucleus Hs cellular component 413 1.42e-145
nucleoplasm Hs cellular component 413 1.42e-145
Ada2/Gcn5/Ada3 transcription activator complex Hs cellular component 135 1.32e-37
spliceosomal complex Hs cellular component 413 1.42e-145
U5 snRNP Hs cellular component 413 1.42e-145
small nucleolar ribonucleoprotein complex Hs cellular component 413 1.42e-145
cytosol Hs cellular component 413 1.42e-145
membrane Hs cellular component 413 1.42e-145
integral component of membrane Hs cellular component 413 1.42e-145
nuclear speck Hs cellular component 413 1.42e-145
histone-lysine N-methyltransferase activity Hs molecular function 135 1.32e-37
methylated histone binding Hs molecular function 135 1.32e-37
histone methyltransferase complex Hs cellular component 135 1.32e-37
ciliary basal body Hs cellular component 140 1.83e-39
histone methyltransferase activity (H3-K4 specific) Hs molecular function 135 1.32e-37
histone acetyltransferase activity (H4-K5 specific) Hs molecular function 135 1.32e-37
histone acetyltransferase activity (H4-K8 specific) Hs molecular function 135 1.32e-37
MLL3/4 complex Hs cellular component 135 1.32e-37
histone acetyltransferase activity (H4-K16 specific) Hs molecular function 135 1.32e-37
Set1C/COMPASS complex Hs cellular component 135 1.32e-37
U2-type catalytic step 2 spliceosome Hs cellular component 413 1.42e-145
precatalytic spliceosome Hs cellular component 413 1.42e-145
catalytic step 2 spliceosome Hs cellular component 413 1.42e-145
MLL1 complex Hs cellular component 135 1.32e-37

GO (InterProScan)

1 result

GO Term Analysis Type e-value
protein binding Gene3D molecular function 3.0E-90