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GENE CARD

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  1. Gene 'Moocci.CG.ELv1_2.S63...'

Gene Card

Best human hits

TCEA1; TCEA2; TCEA3

Species

M.occidentalis

Unique Gene ID

Moocci.g00028333

Gene Model ID

Moocci.CG.ELv1_2.S637739.g28333

Location

S637739:64656..65526

Transcript Models and Sequences

  Moocci.CG.ELv1_2.S637739.g28333.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

16 results

IPR Term Analysis Definition
Znf_TFIIS ProSiteProfiles Zinc finger, TFIIS-type
TFIIS/LEDGF_dom_sf SUPERFAMILY TFIIS/LEDGF domain superfamily
TF_IIS-typ PIRSF Transcription elongation factor, IIS-type
TFIIS_cen_dom_sf SUPERFAMILY Transcription elongation factor S-II, central domain superfamily
TFIIS/LEDGF_dom_sf Gene3D TFIIS/LEDGF domain superfamily
TFIIS/CRSP70_N_sub SMART Transcription elongation factor, TFIIS/CRSP70, N-terminal, sub-type
TFSII TIGRFAM Transcription elongation factor, TFIIS
TFIIS_N ProSiteProfiles Transcription factor IIS, N-terminal
TFIIS_cen_dom ProSiteProfiles Transcription elongation factor S-II, central domain
TFIIS_cen_dom_sf Gene3D Transcription elongation factor S-II, central domain superfamily
Znf_TFIIS Pfam Zinc finger, TFIIS-type
TFIIS_cen_dom Pfam Transcription elongation factor S-II, central domain
TFIIS_cen_dom SMART Transcription elongation factor S-II, central domain
TFIIS_N Pfam Transcription factor IIS, N-terminal
Znf_TFIIS SMART Zinc finger, TFIIS-type
Znf_TFIIS ProSitePatterns Zinc finger, TFIIS-type

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

19 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
nucleic acid binding Hs molecular function
DNA binding Hs molecular function
translation elongation factor activity Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
transcription factor TFIID complex Hs cellular component
nucleolus Hs cellular component
transcription-coupled nucleotide-excision repair Hs biological process
transcription, DNA-templated Hs biological process
regulation of transcription, DNA-templated Hs biological process
transcription from RNA polymerase II promoter Hs biological process
transcription elongation from RNA polymerase II promoter Hs biological process
translational elongation Hs biological process
transcription elongation factor complex Hs cellular component
zinc ion binding Hs molecular function
regulation of DNA-templated transcription, elongation Hs biological process
positive regulation of transcription from RNA polymerase II promoter Hs biological process
metal ion binding Hs molecular function

GO (Blast)

11 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nucleic acid binding Hs molecular function 301 1.07e-102
DNA binding Hs molecular function 301 1.07e-102
translation elongation factor activity Hs molecular function 301 1.07e-102
protein binding Hs molecular function 301 1.07e-102
nucleus Hs cellular component 301 1.07e-102
nucleoplasm Hs cellular component 286 1.40e-96
transcription factor TFIID complex Hs cellular component 286 1.40e-96
nucleolus Hs cellular component 286 1.40e-96
transcription elongation factor complex Hs cellular component 301 1.07e-102
zinc ion binding Hs molecular function 301 1.07e-102
metal ion binding Hs molecular function 301 1.07e-102

GO (InterProScan)

5 results

GO Term Analysis Type e-value
nucleic acid binding TIGRFAM molecular function 1.9E-92
nucleus TIGRFAM cellular component 1.9E-92
transcription, DNA-templated TIGRFAM biological process 1.9E-92
regulation of transcription, DNA-templated TIGRFAM biological process 1.9E-92
zinc ion binding SMART molecular function 8.5E-19