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GENE CARD

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  1. Pub 'PMID:10398533'

Gene Card

Best human hits

NOTO; VAX1; VAX2

Species

M.occidentalis

Unique Gene ID

Moocci.g00028567

Gene Model ID

Moocci.CG.ELv1_2.S639454.g28567

Location

S639454:7005..7725

Transcript Models and Sequences

  Moocci.CG.ELv1_2.S639454.g28567.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term Analysis Definition
Homeobox-like_sf SUPERFAMILY Homeobox-like domain superfamily
Homeobox_dom CDD Homeobox domain
Homeobox_dom ProSiteProfiles Homeobox domain
Homeobox_dom SMART Homeobox domain
Homeobox_CS ProSitePatterns Homeobox, conserved site
Homeobox_dom Pfam Homeobox domain

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

10 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function 87.0 1.43e-20
RNA polymerase II intronic transcription regulatory region sequence-specific DNA binding Hs molecular function 75.1 5.37e-16
transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific binding Hs molecular function 75.1 5.37e-16
DNA binding Hs molecular function 87.0 1.43e-20
transcription factor activity, sequence-specific DNA binding Hs molecular function 75.1 5.37e-16
ATP binding Hs molecular function 75.1 5.37e-16
nucleus Hs cellular component 87.0 1.43e-20
cytoplasm Hs cellular component 75.1 5.37e-16
chromatin DNA binding Hs molecular function 75.1 5.37e-16
sequence-specific DNA binding Hs molecular function 75.1 5.37e-16

GO (InterProScan)

3 results

GO Term Analysis Type e-value
DNA binding SMART molecular function 6.2E-24
regulation of transcription, DNA-templated ProSitePatterns biological process
sequence-specific DNA binding ProSitePatterns molecular function