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GENE CARD

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Gene Card

Best human hits

LRFN5; SLIT1; SLIT2

Species

M.occidentalis

Unique Gene ID

Moocci.g00028893

Gene Model ID

Moocci.CG.ELv1_2.S641140.g28893

Location

S641140:29281..34089

Transcript Models and Sequences

  Moocci.CG.ELv1_2.S641140.g28893.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

10 results

IPR Term Analysis Definition
Leu-rich_rpt ProSiteProfiles Leucine-rich repeat
LRR_dom_sf Gene3D Leucine-rich repeat domain superfamily
Ig-like_dom_sf SUPERFAMILY Immunoglobulin-like domain superfamily
Ig-like_fold Gene3D Immunoglobulin-like fold
Cys-rich_flank_reg_C SMART Cysteine-rich flanking region, C-terminal
Ig-like_dom ProSiteProfiles Immunoglobulin-like domain
Ig_sub SMART Immunoglobulin subtype
Leu-rich_rpt Pfam Leucine-rich repeat
Leu-rich_rpt_typical-subtyp SMART Leucine-rich repeat, typical subtype
Ig_sub2 SMART Immunoglobulin subtype 2

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

19 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
GTPase inhibitor activity Hs molecular function 95.5 1.01e-20
calcium ion binding Hs molecular function 100 2.86e-22
protein binding Hs molecular function 100 2.86e-22
extracellular region Hs cellular component 100 2.86e-22
proteinaceous extracellular matrix Hs cellular component 92.0 1.03e-19
extracellular space Hs cellular component 100 2.86e-22
intracellular Hs cellular component 100 2.86e-22
cytoplasm Hs cellular component 95.5 1.01e-20
plasma membrane Hs cellular component 95.5 1.01e-20
heparin binding Hs molecular function 95.5 1.01e-20
cell surface Hs cellular component 92.0 1.03e-19
membrane Hs cellular component 95.5 1.01e-20
integral component of membrane Hs cellular component 92.0 1.03e-19
identical protein binding Hs molecular function 95.5 1.01e-20
protein homodimerization activity Hs molecular function 95.5 1.01e-20
laminin-1 binding Hs molecular function 95.5 1.01e-20
proteoglycan binding Hs molecular function 95.5 1.01e-20
Roundabout binding Hs molecular function 100 2.86e-22
extracellular exosome Hs cellular component 95.5 1.01e-20

GO (InterProScan)

1 result

GO Term Analysis Type e-value
protein binding Pfam molecular function 1.3E-12