Aniseed - Gene card

Gene Card

Best human hits

SMYD1; SMYD2; SMYD3

Species

M.occidentalis

Unique Gene ID

Moocci.g00030121

Gene Model ID

Moocci.CG.ELv1_2.S649805.g30121

Location

S649805:1624..9274

Transcript Models and Sequences

Moocci.CG.ELv1_2.S649805.g30121.01.t

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term	Analysis	Definition
SET_dom	Pfam	SET domain
TPR-like_helical_dom_sf	Gene3D	Tetratricopeptide-like helical domain superfamily
SET_dom	ProSiteProfiles	SET domain
Znf_MYND	Pfam	Zinc finger, MYND-type
Znf_MYND	ProSiteProfiles	Zinc finger, MYND-type

GOSlim

No result

GO Term	Annotation Origin	Type

GO (Orthology)

20 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
RNA polymerase II core promoter proximal region sequence-specific DNA binding	Hs	molecular function
RNA polymerase II core binding	Hs	molecular function
RNA polymerase II intronic transcription regulatory region sequence-specific DNA binding	Hs	molecular function
protein binding	Hs	molecular function
nucleus	Hs	cellular component
nucleoplasm	Hs	cellular component
cytoplasm	Hs	cellular component
cytosol	Hs	cellular component
chromatin organization	Hs	biological process
nucleosome assembly	Hs	biological process
negative regulation of protein kinase activity	Hs	biological process
methyltransferase activity	Hs	molecular function
transferase activity	Hs	molecular function
histone-lysine N-methyltransferase activity	Hs	molecular function
methylation	Hs	biological process
positive regulation of peptidyl-serine phosphorylation	Hs	biological process
histone lysine methylation	Hs	biological process
establishment of protein localization	Hs	biological process
positive regulation of transcription from RNA polymerase II promoter	Hs	biological process
metal ion binding	Hs	molecular function

GO (Blast)

18 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
RNA polymerase II core promoter proximal region sequence-specific DNA binding	Hs	molecular function	178	4.61e-51
RNA polymerase II core binding	Hs	molecular function	178	4.61e-51
RNA polymerase II intronic transcription regulatory region sequence-specific DNA binding	Hs	molecular function	178	4.61e-51
p53 binding	Hs	molecular function	85.9	4.72e-18
DNA binding	Hs	molecular function	108	1.58e-25
transcription corepressor activity	Hs	molecular function	108	1.58e-25
protein binding	Hs	molecular function	178	4.61e-51
nucleus	Hs	cellular component	178	4.61e-51
nucleoplasm	Hs	cellular component	178	4.61e-51
cytoplasm	Hs	cellular component	178	4.61e-51
cytosol	Hs	cellular component	178	4.61e-51
methyltransferase activity	Hs	molecular function	178	4.61e-51
lysine N-methyltransferase activity	Hs	molecular function	85.9	4.72e-18
protein-lysine N-methyltransferase activity	Hs	molecular function	85.9	4.72e-18
transferase activity	Hs	molecular function	178	4.61e-51
histone-lysine N-methyltransferase activity	Hs	molecular function	178	4.61e-51
metal ion binding	Hs	molecular function	178	4.61e-51
histone methyltransferase activity (H3-K36 specific)	Hs	molecular function	85.9	4.72e-18

GO (InterProScan)

1 result

GO Term	Analysis	Type	e-value
protein binding	Gene3D	molecular function	5.9E-19