Login
Help

GENE CARD

Submit your Data

  1. Gene 'Moocci.CG.ELv1_2.S65...'

Gene Card

Best human hits

SCN1A; SCN3A; SCN4A

Species

M.occidentalis

Unique Gene ID

Moocci.g00030309

Gene Model ID

Moocci.CG.ELv1_2.S650825.g30309

Location

S650825:51308..56269

Transcript Models and Sequences

  Moocci.CG.ELv1_2.S650825.g30309.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

3 results

IPR Term Analysis Definition
Ion_trans_dom Pfam Ion transport domain
Na_channel_asu PRINTS Voltage gated sodium channel, alpha subunit
EF-hand-dom_pair SUPERFAMILY EF-hand domain pair

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

21 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
voltage-gated sodium channel complex Hs cellular component 268 5.77e-82
ion channel activity Hs molecular function 268 5.77e-82
voltage-gated ion channel activity Hs molecular function 268 5.77e-82
voltage-gated sodium channel activity Hs molecular function 268 5.77e-82
sodium channel activity Hs molecular function 268 5.77e-82
protein binding Hs molecular function 268 5.77e-82
nucleoplasm Hs cellular component 263 8.00e-80
cytoplasm Hs cellular component 265 1.37e-80
plasma membrane Hs cellular component 268 5.77e-82
integral component of plasma membrane Hs cellular component 268 5.77e-82
intercalated disc Hs cellular component 263 8.00e-80
membrane Hs cellular component 268 5.77e-82
integral component of membrane Hs cellular component 268 5.77e-82
nuclear body Hs cellular component 263 8.00e-80
Z disc Hs cellular component 263 8.00e-80
T-tubule Hs cellular component 263 8.00e-80
axon Hs cellular component 263 8.00e-80
node of Ranvier Hs cellular component 263 8.00e-80
sodium channel complex Hs cellular component 263 8.00e-80
neuronal cell body Hs cellular component 263 8.00e-80
axon initial segment Hs cellular component 263 8.00e-80

GO (InterProScan)

7 results

GO Term Analysis Type e-value
voltage-gated sodium channel complex PRINTS cellular component 3.0E-11
ion channel activity Pfam molecular function 1.7E-21
voltage-gated sodium channel activity PRINTS molecular function 3.0E-11
ion transport Pfam biological process 1.7E-21
sodium ion transport PRINTS biological process 3.0E-11
membrane Pfam cellular component 1.7E-21
transmembrane transport Pfam biological process 1.7E-21