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  1. Gene 'Moocul.CG.ELv1_2.S45...' > 

Gene Card

Best human hits

EXD3; EXOSC10

Species

M.occidentalis

Unique Gene ID

Moocci.g00001067

Gene Model ID

Moocci.CG.ELv1_2.S79567.g01067

Location

S79567:41805..49424

Transcript Models and Sequences

  Moocci.CG.ELv1_2.S79567.g01067.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

8 results

IPR Term Analysis Definition
Exosome-assoc_fac_Rrp6_N Pfam Exosome-associated factor Rrp6, N-terminal
HRDC_dom ProSiteProfiles HRDC domain
HRDC-like_sf SUPERFAMILY HRDC-like superfamily
3'-5'_exonuclease_dom Pfam 3'-5' exonuclease domain
RNaseH-like_sf SUPERFAMILY Ribonuclease H-like superfamily
3'-5'_exonuclease_dom SMART 3'-5' exonuclease domain
HRDC_dom Pfam HRDC domain
HRDC_dom SMART HRDC domain

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

36 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
nucleotide binding Hs molecular function
3'-5'-exoribonuclease activity Hs molecular function
nuclear exosome (RNase complex) Hs cellular component
exosome (RNase complex) Hs cellular component
nuclear-transcribed mRNA catabolic process, nonsense-mediated decay Hs biological process
maturation of 5.8S rRNA Hs biological process
nuclear-transcribed mRNA catabolic process Hs biological process
nucleic acid binding Hs molecular function
RNA binding Hs molecular function
catalytic activity Hs molecular function
nuclease activity Hs molecular function
exonuclease activity Hs molecular function
exoribonuclease activity Hs molecular function
protein binding Hs molecular function
intracellular Hs cellular component
nucleus Hs cellular component
nucleoplasm Hs cellular component
nucleolus Hs cellular component
cytoplasm Hs cellular component
cytosol Hs cellular component
nucleobase-containing compound metabolic process Hs biological process
rRNA processing Hs biological process
RNA processing Hs biological process
3'-5' exonuclease activity Hs molecular function
membrane Hs cellular component
hydrolase activity Hs molecular function
negative regulation of telomere maintenance via telomerase Hs biological process
transcriptionally active chromatin Hs cellular component
cellular metabolic process Hs biological process
telomerase RNA binding Hs molecular function
nuclear mRNA surveillance Hs biological process
CUT catabolic process Hs biological process
nuclear polyadenylation-dependent rRNA catabolic process Hs biological process
nuclear retention of unspliced pre-mRNA at the site of transcription Hs biological process
nucleic acid phosphodiester bond hydrolysis Hs biological process
RNA phosphodiester bond hydrolysis, exonucleolytic Hs biological process

GO (Blast)

23 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
nucleotide binding Hs molecular function 552 0.0
3'-5'-exoribonuclease activity Hs molecular function 552 0.0
nuclear exosome (RNase complex) Hs cellular component 552 0.0
exosome (RNase complex) Hs cellular component 552 0.0
nucleic acid binding Hs molecular function 552 0.0
RNA binding Hs molecular function 552 0.0
catalytic activity Hs molecular function 552 0.0
nuclease activity Hs molecular function 552 0.0
exonuclease activity Hs molecular function 552 0.0
exoribonuclease activity Hs molecular function 552 0.0
protein binding Hs molecular function 552 0.0
intracellular Hs cellular component 552 0.0
nucleus Hs cellular component 552 0.0
nucleoplasm Hs cellular component 552 0.0
nucleolus Hs cellular component 552 0.0
cytoplasm Hs cellular component 552 0.0
cytosol Hs cellular component 552 0.0
3'-5' exonuclease activity Hs molecular function 552 0.0
membrane Hs cellular component 552 0.0
hydrolase activity Hs molecular function 552 0.0
transcriptionally active chromatin Hs cellular component 552 0.0
metal ion binding Hs molecular function 41.2 0.002
telomerase RNA binding Hs molecular function 552 0.0

GO (InterProScan)

9 results

GO Term Analysis Type e-value
nucleotide binding SUPERFAMILY molecular function 4.45E-23
nuclear exosome (RNase complex) Pfam cellular component 7.4E-17
nucleic acid binding SMART molecular function 1.8E-47
catalytic activity SUPERFAMILY molecular function 4.45E-23
intracellular SMART cellular component 3.1E-17
nucleobase-containing compound metabolic process SMART biological process 1.8E-47
RNA processing Pfam biological process 7.4E-17
3'-5' exonuclease activity SMART molecular function 1.8E-47
cellular metabolic process SUPERFAMILY biological process 4.45E-23

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