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GENE CARD

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Gene Card

Best human hits

RBMS1; RBMS2; RBMS3

Species

M.occulta

Unique Gene ID

Mooccu.g00003846

Gene Model ID

Mooccu.CG.ELv1_2.S126563.g03846

Location

S126563:15160..29307

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term Analysis Definition
RRM_dom ProSiteProfiles RNA recognition motif domain
Nucleotide-bd_a/b_plait_sf Gene3D Nucleotide-binding alpha-beta plait domain superfamily
RBD_domain_sf SUPERFAMILY RNA-binding domain superfamily
Hud_Sxl_RNA PRINTS Paraneoplastic encephalomyelitis antigen
RRM_dom SMART RNA recognition motif domain
RRM_dom Pfam RNA recognition motif domain

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

13 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nucleic acid binding Hs molecular function 265 1.74e-84
DNA binding Hs molecular function 258 8.01e-82
double-stranded DNA binding Hs molecular function 258 8.01e-82
single-stranded DNA binding Hs molecular function 258 8.01e-82
RNA binding Hs molecular function 265 1.74e-84
mRNA 3'-UTR binding Hs molecular function 265 1.74e-84
protein binding Hs molecular function 258 8.01e-82
nucleus Hs cellular component 263 3.81e-84
cytoplasm Hs cellular component 265 1.74e-84
cytosol Hs cellular component 258 8.01e-82
poly(A) binding Hs molecular function 265 1.74e-84
poly(U) RNA binding Hs molecular function 265 1.74e-84
mRNA 3'-UTR AU-rich region binding Hs molecular function 265 1.74e-84

GO (InterProScan)

2 results

GO Term Analysis Type e-value
nucleic acid binding SUPERFAMILY molecular function 5.51E-20
RNA binding PRINTS molecular function 5.0E-6