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GENE CARD

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Gene Card

Best human hits

PAX3; PAX7; PITX1

Species

M.occulta

Unique Gene ID

Mooccu.g00016489

Gene Model ID

Mooccu.CG.ELv1_2.S371759.g16489

Location

S371759:1964..3201

Transcript Models and Sequences

  Mooccu.CG.ELv1_2.S371759.g16489.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

2 results

IPR Term Analysis Definition
Homeobox_dom CDD Homeobox domain
Homeobox_dom ProSiteProfiles Homeobox domain

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

16 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
RNA polymerase II core promoter proximal region sequence-specific DNA binding Hs molecular function 45.4 1.79e-05
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function 45.4 1.79e-05
transcription factor activity, RNA polymerase II core promoter sequence-specific Hs molecular function 45.1 4.13e-05
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding Hs molecular function 45.4 1.79e-05
RNA polymerase II transcription factor binding Hs molecular function 45.4 1.79e-05
transcriptional activator activity, RNA polymerase II transcription factor binding Hs molecular function 45.4 1.79e-05
DNA binding Hs molecular function 45.4 1.79e-05
transcription factor activity, sequence-specific DNA binding Hs molecular function 45.4 1.79e-05
protein binding Hs molecular function 45.4 1.79e-05
nucleus Hs cellular component 45.4 1.79e-05
nucleoplasm Hs cellular component 44.7 4.26e-05
transcription factor complex Hs cellular component 45.4 1.79e-05
nucleolus Hs cellular component 45.4 1.79e-05
cytoplasm Hs cellular component 45.4 1.79e-05
sequence-specific DNA binding Hs molecular function 45.4 1.79e-05
HMG box domain binding Hs molecular function 44.7 4.26e-05

GO (InterProScan)

1 result

GO Term Analysis Type e-value
DNA binding CDD molecular function 0.00151284