Login
Help

GENE CARD

Submit your Data

Gene Card

Best human hits

NPC1; PTCH1; PTCH2

Species

M.occulta

Unique Gene ID

Mooccu.g00031345

Gene Model ID

Mooccu.CG.ELv1_2.S540166.g31345

Location

S540166:1802..4892

Transcript Models and Sequences

  Mooccu.CG.ELv1_2.S540166.g31345.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

1 result

IPR Term Analysis Definition
Ptc/Disp Pfam Protein patched/dispatched

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

40 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
virus receptor activity Hs molecular function 54.3 4.54e-08
receptor activity Hs molecular function 54.3 4.54e-08
transmembrane signaling receptor activity Hs molecular function 54.3 4.54e-08
patched binding Hs molecular function 50.8 5.85e-07
smoothened binding Hs molecular function 50.8 5.85e-07
lipid transporter activity Hs molecular function 54.3 4.54e-08
protein binding Hs molecular function 54.3 4.54e-08
extracellular region Hs cellular component 54.3 4.54e-08
nucleus Hs cellular component 50.8 5.85e-07
nuclear envelope Hs cellular component 54.3 4.54e-08
lysosome Hs cellular component 54.3 4.54e-08
lysosomal membrane Hs cellular component 54.3 4.54e-08
endosome Hs cellular component 54.3 4.54e-08
endoplasmic reticulum Hs cellular component 54.3 4.54e-08
Golgi apparatus Hs cellular component 54.3 4.54e-08
plasma membrane Hs cellular component 54.3 4.54e-08
integral component of plasma membrane Hs cellular component 54.3 4.54e-08
caveola Hs cellular component 50.8 5.85e-07
cilium Hs cellular component 50.8 5.85e-07
hedgehog receptor activity Hs molecular function 50.8 5.85e-07
heparin binding Hs molecular function 50.8 5.85e-07
postsynaptic density Hs cellular component 50.8 5.85e-07
sterol transporter activity Hs molecular function 54.3 4.54e-08
cholesterol binding Hs molecular function 54.3 4.54e-08
membrane Hs cellular component 54.3 4.54e-08
integral component of membrane Hs cellular component 54.3 4.54e-08
cyclin binding Hs molecular function 50.8 5.85e-07
midbody Hs cellular component 50.8 5.85e-07
endocytic vesicle membrane Hs cellular component 50.8 5.85e-07
late endosome membrane Hs cellular component 54.3 4.54e-08
vesicle Hs cellular component 54.3 4.54e-08
intracellular membrane-bounded organelle Hs cellular component 50.8 5.85e-07
dendritic growth cone Hs cellular component 50.8 5.85e-07
axonal growth cone Hs cellular component 50.8 5.85e-07
macromolecular complex binding Hs molecular function 50.8 5.85e-07
membrane raft Hs cellular component 54.3 4.54e-08
perinuclear region of cytoplasm Hs cellular component 54.3 4.54e-08
ciliary membrane Hs cellular component 50.8 5.85e-07
extracellular exosome Hs cellular component 54.3 4.54e-08
hedgehog family protein binding Hs molecular function 50.8 5.85e-07

GO (InterProScan)

1 result

GO Term Analysis Type e-value
integral component of membrane Pfam cellular component 7.7E-24