Aniseed - Gene card

Gene Card

Best human hits

RBPJ; RBPJL

Species

M.oculata

Unique Gene ID

Moocul.g00009130

Gene Model ID

Moocul.CG.ELv1_2.S101491.g09130

Location

S101491:14124..19272

Transcript Models and Sequences

Moocul.CG.ELv1_2.S101491.g09130.01.t

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term	Analysis	Definition
Ig_E-set	SUPERFAMILY	Immunoglobulin E-set
Ig-like_fold	Gene3D	Immunoglobulin-like fold
Beta-trefoil_DNA-bd_dom	Pfam	Beta-trefoil DNA-binding domain
Beta-trefoil_DNA-bd_dom	SMART	Beta-trefoil DNA-binding domain
BTD_sf	SUPERFAMILY	Beta-trefoil domain superfamily
RBP-Jkappa_IPT	CDD	RBP-Jkappa, IPT domain

GOSlim

No result

GO Term	Annotation Origin	Type

GO (Orthology)

67 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
negative regulation of transcription from RNA polymerase II promoter	Hs	biological process
recombinase activity	Hs	molecular function
RNA polymerase II core promoter proximal region sequence-specific DNA binding	Hs	molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Hs	molecular function
transcription factor activity, RNA polymerase II core promoter proximal region sequence-specific binding	Hs	molecular function
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding	Hs	molecular function
RNA polymerase II repressing transcription factor binding	Hs	molecular function
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	Hs	molecular function
angiogenesis	Hs	biological process
somitogenesis	Hs	biological process
epithelial to mesenchymal transition	Hs	biological process
MAML1-RBP-Jkappa- ICN1 complex	Hs	cellular component
outflow tract morphogenesis	Hs	biological process
endocardium development	Hs	biological process
endocardium morphogenesis	Hs	biological process
ventricular trabecula myocardium morphogenesis	Hs	biological process
DNA binding	Hs	molecular function
chromatin binding	Hs	molecular function
transcription factor activity, sequence-specific DNA binding	Hs	molecular function
protein binding	Hs	molecular function
nucleus	Hs	cellular component
nucleoplasm	Hs	cellular component
transcription factor complex	Hs	cellular component
nucleolus	Hs	cellular component
cytoplasm	Hs	cellular component
DNA recombination	Hs	biological process
transcription, DNA-templated	Hs	biological process
regulation of transcription, DNA-templated	Hs	biological process
regulation of transcription from RNA polymerase II promoter	Hs	biological process
transcription initiation from RNA polymerase II promoter	Hs	biological process
humoral immune response	Hs	biological process
Notch signaling pathway	Hs	biological process
positive regulation of transcription of Notch receptor target	Hs	biological process
heart development	Hs	biological process
transcription factor binding	Hs	molecular function
positive regulation of cell proliferation	Hs	biological process
negative regulation of cell proliferation	Hs	biological process
epidermal cell fate specification	Hs	biological process
regulation of gene expression	Hs	biological process
positive regulation of gene expression	Hs	biological process
transcriptional repressor complex	Hs	cellular component
pituitary gland development	Hs	biological process
hemopoiesis	Hs	biological process
neuron differentiation	Hs	biological process
B cell differentiation	Hs	biological process
keratinocyte differentiation	Hs	biological process
negative regulation of ossification	Hs	biological process
positive regulation of BMP signaling pathway	Hs	biological process
somatic stem cell population maintenance	Hs	biological process
dorsal aorta morphogenesis	Hs	biological process
atrioventricular canal development	Hs	biological process
regulation of cell proliferation	Hs	biological process
defense response to bacterium	Hs	biological process
myeloid dendritic cell differentiation	Hs	biological process
sequence-specific DNA binding	Hs	molecular function
cell fate commitment	Hs	biological process
negative regulation of cell differentiation	Hs	biological process
positive regulation of Notch signaling pathway	Hs	biological process
negative regulation of transcription, DNA-templated	Hs	biological process
positive regulation of transcription from RNA polymerase II promoter	Hs	biological process
protein N-terminus binding	Hs	molecular function
regulation of timing of cell differentiation	Hs	biological process
artery morphogenesis	Hs	biological process
arterial endothelial cell fate commitment	Hs	biological process
repressing transcription factor binding	Hs	molecular function
blood vessel lumenization	Hs	biological process
blood vessel endothelial cell fate specification	Hs	biological process

GO (Blast)

23 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
recombinase activity	Hs	molecular function	515	0.0
RNA polymerase II regulatory region sequence-specific DNA binding	Hs	molecular function	331	1.82e-110
RNA polymerase II core promoter proximal region sequence-specific DNA binding	Hs	molecular function	515	0.0
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Hs	molecular function	515	0.0
transcription factor activity, RNA polymerase II core promoter proximal region sequence-specific binding	Hs	molecular function	515	0.0
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding	Hs	molecular function	515	0.0
RNA polymerase II repressing transcription factor binding	Hs	molecular function	515	0.0
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	Hs	molecular function	515	0.0
MAML1-RBP-Jkappa- ICN1 complex	Hs	cellular component	515	0.0
DNA binding	Hs	molecular function	515	0.0
chromatin binding	Hs	molecular function	515	0.0
transcription factor activity, sequence-specific DNA binding	Hs	molecular function	515	0.0
protein binding	Hs	molecular function	515	0.0
nucleus	Hs	cellular component	515	0.0
nucleoplasm	Hs	cellular component	515	0.0
transcription factor complex	Hs	cellular component	515	0.0
nucleolus	Hs	cellular component	515	0.0
cytoplasm	Hs	cellular component	515	0.0
transcription factor binding	Hs	molecular function	515	0.0
transcriptional repressor complex	Hs	cellular component	515	0.0
sequence-specific DNA binding	Hs	molecular function	515	0.0
protein N-terminus binding	Hs	molecular function	515	0.0
repressing transcription factor binding	Hs	molecular function	515	0.0

GO (InterProScan)

4 results

GO Term	Analysis	Type	e-value
RNA polymerase II core promoter proximal region sequence-specific DNA binding	SMART	molecular function	5.9E-90
transcription factor activity, RNA polymerase II core promoter proximal region sequence-specific binding	SMART	molecular function	5.9E-90
DNA binding	CDD	molecular function	9.89634E-65
regulation of transcription, DNA-templated	SMART	biological process	5.9E-90