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GENE CARD

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Gene Card

Best human hits

SNAI1; SNAI2; SNAI3

Species

M.oculata

Unique Gene ID

Moocul.g00009786

Gene Model ID

Moocul.CG.ELv1_2.S104226.g09786

Location

S104226:2753..5901

Transcript Models and Sequences

  Moocul.CG.ELv1_2.S104226.g09786.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term Analysis Definition
Znf_C2H2_type ProSitePatterns Zinc finger C2H2-type
Znf_C2H2_type ProSiteProfiles Zinc finger C2H2-type
Znf_C2H2_sf SUPERFAMILY Zinc finger C2H2 superfamily
Znf_C2H2_type SMART Zinc finger C2H2-type

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

23 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nuclear chromatin Hs cellular component 210 2.78e-63
RNA polymerase II regulatory region sequence-specific DNA binding Hs molecular function 202 6.01e-60
RNA polymerase II core promoter proximal region sequence-specific DNA binding Hs molecular function 202 6.01e-60
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function 210 2.78e-63
transcription factor activity, RNA polymerase II core promoter proximal region sequence-specific binding Hs molecular function 202 6.01e-60
transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding Hs molecular function 210 2.78e-63
transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific binding Hs molecular function 202 6.01e-60
nucleic acid binding Hs molecular function 210 2.78e-63
DNA binding Hs molecular function 210 2.78e-63
chromatin binding Hs molecular function 210 2.78e-63
transcription factor activity, sequence-specific DNA binding Hs molecular function 202 6.01e-60
transcription factor activity, RNA polymerase II distal enhancer sequence-specific binding Hs molecular function 210 2.78e-63
copper ion binding Hs molecular function 202 6.01e-60
protein binding Hs molecular function 210 2.78e-63
nucleus Hs cellular component 210 2.78e-63
nucleoplasm Hs cellular component 210 2.78e-63
transcription factor complex Hs cellular component 202 6.01e-60
pericentric heterochromatin Hs cellular component 186 2.87e-54
cytoplasm Hs cellular component 210 2.78e-63
cytosol Hs cellular component 186 2.87e-54
kinase binding Hs molecular function 186 2.87e-54
sequence-specific DNA binding Hs molecular function 210 2.78e-63
metal ion binding Hs molecular function 210 2.78e-63

GO (InterProScan)

1 result

GO Term Analysis Type e-value
nucleic acid binding SMART molecular function 1.8E-4