Login
Help

GENE CARD

Submit your Data

Gene Card

Best human hits

MVD; RGP1

Species

M.oculata

Unique Gene ID

Moocul.g00010636

Gene Model ID

Moocul.CG.ELv1_2.S107629.g10636

Location

S107629:2766..19093

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

13 results

IPR Term Analysis Definition
Acid_Pase_AS ProSitePatterns Histidine acid phosphatase active site
His_Pase_clade-2 Pfam Histidine phosphatase superfamily, clade-2
His_PPase_superfam Gene3D Histidine phosphatase superfamily
His_PPase_superfam SUPERFAMILY Histidine phosphatase superfamily
His_Pase_clade-2 CDD Histidine phosphatase superfamily, clade-2
GHMP_kinase_N_dom Pfam GHMP kinase N-terminal domain
GHMP_kinase_C_sf SUPERFAMILY GHMP kinase, C-terminal domain superfamily
GHMP_kinase_C_sf Gene3D GHMP kinase, C-terminal domain superfamily
Rgp1 Pfam Reduced growth phenotype protein 1
Arrestin_C Gene3D Arrestin, C-terminal
Ribosomal_S5_D2-typ_fold_subgr Gene3D Ribosomal protein S5 domain 2-type fold, subgroup
Ribosomal_S5_D2-typ_fold SUPERFAMILY Ribosomal protein S5 domain 2-type fold
Mev_diP_decarb TIGRFAM Diphosphomevalonate decarboxylase

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

15 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
Golgi membrane Hs cellular component
guanyl-nucleotide exchange factor activity Hs molecular function
protein binding Hs molecular function
cytoplasm Hs cellular component
cytosol Hs cellular component
plasma membrane Hs cellular component
membrane Hs cellular component
Rab guanyl-nucleotide exchange factor activity Hs molecular function
Rab GTPase binding Hs molecular function
trans-Golgi network membrane Hs cellular component
macromolecular complex Hs cellular component
RIC1-RGP1 guanyl-nucleotide exchange factor complex Hs cellular component
retrograde transport, endosome to Golgi Hs biological process
positive regulation of GTPase activity Hs biological process
negative regulation of cellular protein catabolic process Hs biological process

GO (Blast)

19 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
Golgi membrane Hs cellular component 325 3.83e-104
nucleotide binding Hs molecular function 355 1.17e-115
diphosphomevalonate decarboxylase activity Hs molecular function 355 1.17e-115
guanyl-nucleotide exchange factor activity Hs molecular function 325 3.83e-104
protein binding Hs molecular function 325 3.83e-104
ATP binding Hs molecular function 355 1.17e-115
cytoplasm Hs cellular component 325 3.83e-104
cytosol Hs cellular component 355 1.17e-115
plasma membrane Hs cellular component 325 3.83e-104
membrane Hs cellular component 325 3.83e-104
lyase activity Hs molecular function 355 1.17e-115
carboxy-lyase activity Hs molecular function 355 1.17e-115
Rab guanyl-nucleotide exchange factor activity Hs molecular function 325 3.83e-104
Rab GTPase binding Hs molecular function 325 3.83e-104
Hsp70 protein binding Hs molecular function 355 1.17e-115
trans-Golgi network membrane Hs cellular component 325 3.83e-104
macromolecular complex Hs cellular component 325 3.83e-104
RIC1-RGP1 guanyl-nucleotide exchange factor complex Hs cellular component 325 3.83e-104
protein homodimerization activity Hs molecular function 355 1.17e-115

GO (InterProScan)

5 results

GO Term Analysis Type e-value
diphosphomevalonate decarboxylase activity TIGRFAM molecular function 2.9E-94
ATP binding Pfam molecular function 5.9E-7
cytosol TIGRFAM cellular component 2.9E-94
isopentenyl diphosphate biosynthetic process, mevalonate pathway TIGRFAM biological process 2.9E-94
signal transduction Gene3D biological process 4.9E-5