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GENE CARD

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Gene Card

Best human hits

AP002495.1; L34079.1; XRCC1

Species

M.oculata

Unique Gene ID

Moocul.g00010896

Gene Model ID

Moocul.CG.ELv1_2.S108505.g10896

Location

S108505:3767..6450

Transcript Models and Sequences

  Moocul.CG.ELv1_2.S108505.g10896.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

9 results

IPR Term Analysis Definition
Galactose-bd-like_sf SUPERFAMILY Galactose-binding-like domain superfamily
BRCT_dom Pfam BRCT domain
BRCT_dom CDD BRCT domain
BRCT_dom_sf SUPERFAMILY BRCT domain superfamily
BRCT_dom_sf Gene3D BRCT domain superfamily
BRCT_dom ProSiteProfiles BRCT domain
Xrcc1_N Pfam DNA-repair protein Xrcc1, N-terminal
Galactose-bd-like_sf Gene3D Galactose-binding-like domain superfamily
BRCT_dom SMART BRCT domain

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

24 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
single strand break repair Hs biological process
double-strand break repair via homologous recombination Hs biological process
nuclear chromosome, telomeric region Hs cellular component
nuclear chromatin Hs cellular component
response to hypoxia Hs biological process
damaged DNA binding Hs molecular function
DNA ligase activity Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
nucleolus Hs cellular component
DNA repair Hs biological process
transcription-coupled nucleotide-excision repair Hs biological process
base-excision repair Hs biological process
nucleotide-excision repair, DNA gap filling Hs biological process
double-strand break repair via nonhomologous end joining Hs biological process
cellular response to DNA damage stimulus Hs biological process
response to organic substance Hs biological process
enzyme binding Hs molecular function
cerebellum morphogenesis Hs biological process
oxidized DNA binding Hs molecular function
response to drug Hs biological process
ERCC4-ERCC1 complex Hs cellular component
3' overhang single-stranded DNA endodeoxyribonuclease activity Hs molecular function

GO (Blast)

12 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nuclear chromosome, telomeric region Hs cellular component 311 2.57e-98
nuclear chromatin Hs cellular component 311 2.57e-98
damaged DNA binding Hs molecular function 311 2.57e-98
DNA ligase activity Hs molecular function 311 2.57e-98
protein binding Hs molecular function 311 2.57e-98
nucleus Hs cellular component 311 2.57e-98
nucleoplasm Hs cellular component 311 2.57e-98
nucleolus Hs cellular component 311 2.57e-98
enzyme binding Hs molecular function 311 2.57e-98
oxidized DNA binding Hs molecular function 311 2.57e-98
ERCC4-ERCC1 complex Hs cellular component 311 2.57e-98
3' overhang single-stranded DNA endodeoxyribonuclease activity Hs molecular function 311 2.57e-98

GO (InterProScan)

3 results

GO Term Analysis Type e-value
single strand break repair Pfam biological process 7.4E-54
damaged DNA binding Pfam molecular function 7.4E-54
nucleus Pfam cellular component 7.4E-54