Login
Help

GENE CARD

Submit your Data

  1. > 

Gene Card

Best human hits

COL11A2; COL5A3

Species

M.oculata

Unique Gene ID

Moocul.g00010915

Gene Model ID

Moocul.CG.ELv1_2.S108546.g10915

Location

S108546:55747..65497

Transcript Models and Sequences

  Moocul.CG.ELv1_2.S108546.g10915.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree
 Click here to see the tree inference method

Gene Annotations

InterPro

7 results

IPR Term Analysis Definition
ConA-like_dom_sf SUPERFAMILY Concanavalin A-like lectin/glucanase domain superfamily
Laminin_G SMART Laminin G domain
Collagen Pfam Collagen triple helix repeat
Fib_collagen_C Pfam Fibrillar collagen, C-terminal
Fib_collagen_C ProDom Fibrillar collagen, C-terminal
Fib_collagen_C SMART Fibrillar collagen, C-terminal
Fib_collagen_C ProSiteProfiles Fibrillar collagen, C-terminal

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

54 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
skeletal system development Hs biological process
extracellular matrix structural constituent Hs molecular function
protein binding Hs molecular function
collagen binding Hs molecular function
extracellular region Hs cellular component
proteinaceous extracellular matrix Hs cellular component
collagen trimer Hs cellular component
collagen type V trimer Hs cellular component
collagen type XI trimer Hs cellular component
endoplasmic reticulum lumen Hs cellular component
cell-matrix adhesion Hs biological process
sensory perception of sound Hs biological process
heparin binding Hs molecular function
extracellular matrix structural constituent conferring tensile strength Hs molecular function
extracellular matrix organization Hs biological process
collagen fibril organization Hs biological process
collagen catabolic process Hs biological process
protein binding, bridging Hs molecular function
extracellular matrix Hs cellular component
proteoglycan binding Hs molecular function
skin development Hs biological process
metal ion binding Hs molecular function
cartilage development Hs biological process
palate development Hs biological process
soft palate development Hs biological process
extracellular exosome Hs cellular component
cartilage condensation Hs biological process
ossification Hs biological process
blood vessel development Hs biological process
osteoblast differentiation Hs biological process
tissue homeostasis Hs biological process
chondrocyte differentiation Hs biological process
chondrocyte development Hs biological process
heart morphogenesis Hs biological process
integrin binding Hs molecular function
basement membrane Hs cellular component
extracellular space Hs cellular component
ribosome Hs cellular component
proteoglycan metabolic process Hs biological process
cell adhesion Hs biological process
visual perception Hs biological process
cell migration Hs biological process
collagen biosynthetic process Hs biological process
wound healing, spreading of epidermal cells Hs biological process
endodermal cell differentiation Hs biological process
tendon development Hs biological process
inner ear morphogenesis Hs biological process
platelet-derived growth factor binding Hs molecular function
eye morphogenesis Hs biological process
skeletal system morphogenesis Hs biological process
extracellular matrix binding Hs molecular function
detection of mechanical stimulus involved in sensory perception of sound Hs biological process
ventricular cardiac muscle tissue morphogenesis Hs biological process
supramolecular fiber organization Hs biological process

GO (Blast)

16 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
extracellular matrix structural constituent Hs molecular function 648 0.0
protein binding Hs molecular function 594 0.0
collagen binding Hs molecular function 619 0.0
extracellular region Hs cellular component 619 0.0
proteinaceous extracellular matrix Hs cellular component 619 0.0
collagen trimer Hs cellular component 619 0.0
collagen type V trimer Hs cellular component 619 0.0
collagen type XI trimer Hs cellular component 594 0.0
endoplasmic reticulum lumen Hs cellular component 619 0.0
heparin binding Hs molecular function 619 0.0
extracellular matrix structural constituent conferring tensile strength Hs molecular function 594 0.0
protein binding, bridging Hs molecular function 594 0.0
extracellular matrix Hs cellular component 619 0.0
proteoglycan binding Hs molecular function 619 0.0
metal ion binding Hs molecular function 594 0.0
extracellular exosome Hs cellular component 619 0.0

GO (InterProScan)

1 result

GO Term Analysis Type e-value
extracellular matrix structural constituent SMART molecular function 2.9E-62

Back to Top