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GENE CARD

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Gene Card

Best human hits

HMCN1; SEMA5A; THBS1

Species

M.oculata

Unique Gene ID

Moocul.g00011110

Gene Model ID

Moocul.CG.ELv1_2.S109151.g11110

Location

S109151:3731..4415

Transcript Models and Sequences

  Moocul.CG.ELv1_2.S109151.g11110.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
TSP1_rpt SMART Thrombospondin type-1 (TSP1) repeat
TSP1_rpt Pfam Thrombospondin type-1 (TSP1) repeat
TSP1_rpt_sf Gene3D Thrombospondin type-1 (TSP1) repeat superfamily
TSP1_rpt ProSiteProfiles Thrombospondin type-1 (TSP1) repeat
TSP1_rpt_sf SUPERFAMILY Thrombospondin type-1 (TSP1) repeat superfamily

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

42 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
phosphatidylserine binding Hs molecular function 99.4 2.12e-24
fibronectin binding Hs molecular function 99.4 2.12e-24
integrin binding Hs molecular function 99.4 2.12e-24
calcium ion binding Hs molecular function 143 1.54e-39
protein binding Hs molecular function 103 1.16e-25
extracellular region Hs cellular component 143 1.54e-39
fibrinogen complex Hs cellular component 99.4 2.12e-24
proteinaceous extracellular matrix Hs cellular component 143 1.54e-39
basement membrane Hs cellular component 143 1.54e-39
extracellular space Hs cellular component 103 1.16e-25
cytoplasm Hs cellular component 143 1.54e-39
endoplasmic reticulum Hs cellular component 99.4 2.12e-24
endoplasmic reticulum lumen Hs cellular component 99.4 2.12e-24
plasma membrane Hs cellular component 103 1.16e-25
cell cortex Hs cellular component 143 1.54e-39
heparin binding Hs molecular function 99.4 2.12e-24
external side of plasma membrane Hs cellular component 99.4 2.12e-24
cell surface Hs cellular component 99.4 2.12e-24
membrane Hs cellular component 103 1.16e-25
integral component of membrane Hs cellular component 103 1.16e-25
sarcoplasmic reticulum Hs cellular component 99.4 2.12e-24
fibroblast growth factor binding Hs molecular function 99.4 2.12e-24
cell junction Hs cellular component 143 1.54e-39
secretory granule Hs cellular component 99.4 2.12e-24
low-density lipoprotein particle binding Hs molecular function 99.4 2.12e-24
semaphorin receptor binding Hs molecular function 103 1.16e-25
extracellular matrix Hs cellular component 143 1.54e-39
platelet alpha granule Hs cellular component 99.4 2.12e-24
platelet alpha granule lumen Hs cellular component 99.4 2.12e-24
cleavage furrow Hs cellular component 143 1.54e-39
chondroitin sulfate proteoglycan binding Hs molecular function 103 1.16e-25
neuropilin binding Hs molecular function 103 1.16e-25
identical protein binding Hs molecular function 99.4 2.12e-24
laminin binding Hs molecular function 99.4 2.12e-24
proteoglycan binding Hs molecular function 99.4 2.12e-24
heparan sulfate proteoglycan binding Hs molecular function 103 1.16e-25
syndecan binding Hs molecular function 103 1.16e-25
transforming growth factor beta binding Hs molecular function 99.4 2.12e-24
extracellular matrix binding Hs molecular function 99.4 2.12e-24
fibrinogen binding Hs molecular function 99.4 2.12e-24
collagen V binding Hs molecular function 99.4 2.12e-24
extracellular exosome Hs cellular component 143 1.54e-39

GO (InterProScan)

No result

GO Term Analysis Type e-value