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GENE CARD

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Gene Card

Best human hits

PAX2; PAX5; PAX8

Species

M.oculata

Unique Gene ID

Moocul.g00011515

Gene Model ID

Moocul.CG.ELv1_2.S110138.g11515

Location

S110138:12235..19846

Transcript Models and Sequences

  Moocul.CG.ELv1_2.S110138.g11515.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

8 results

IPR Term Analysis Definition
Homeobox-like_sf SUPERFAMILY Homeobox-like domain superfamily
Paired_dom ProSiteProfiles Paired domain
WH-like_DNA-bd_sf Gene3D Winged helix-like DNA-binding domain superfamily
Paired_dom PRINTS Paired domain
Paired_dom Pfam Paired domain
Paired_dom CDD Paired domain
Paired_dom ProSitePatterns Paired domain
Paired_dom SMART Paired domain

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

25 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
RNA polymerase II core promoter proximal region sequence-specific DNA binding Hs molecular function 250 9.22e-77
RNA polymerase II core promoter sequence-specific DNA binding Hs molecular function 244 1.03e-73
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function 250 9.22e-77
core promoter proximal region sequence-specific DNA binding Hs molecular function 247 1.91e-75
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding Hs molecular function 250 9.22e-77
fibrillar center Hs cellular component 250 9.22e-77
DNA binding Hs molecular function 250 9.22e-77
transcription factor activity, sequence-specific DNA binding Hs molecular function 250 9.22e-77
thyroid-stimulating hormone receptor activity Hs molecular function 244 1.03e-73
protein binding Hs molecular function 250 9.22e-77
nucleus Hs cellular component 250 9.22e-77
nucleoplasm Hs cellular component 250 9.22e-77
nucleolus Hs cellular component 247 1.91e-75
lysosome Hs cellular component 247 1.91e-75
Golgi apparatus Hs cellular component 247 1.91e-75
microtubule organizing center Hs cellular component 247 1.91e-75
cytosol Hs cellular component 250 9.22e-77
transcription factor binding Hs molecular function 247 1.91e-75
superoxide-generating NADPH oxidase activity Hs molecular function 247 1.91e-75
macromolecular complex Hs cellular component 247 1.91e-75
protein-DNA complex Hs cellular component 247 1.91e-75
centriolar satellite Hs cellular component 247 1.91e-75
intracellular membrane-bounded organelle Hs cellular component 250 9.22e-77
sequence-specific DNA binding Hs molecular function 244 1.03e-73
transcription regulatory region DNA binding Hs molecular function 247 1.91e-75

GO (InterProScan)

2 results

GO Term Analysis Type e-value
DNA binding SMART molecular function 7.7E-91
regulation of transcription, DNA-templated SMART biological process 7.7E-91