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GENE CARD

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Gene Card

Best human hits

FTSJ1; FTSJ3; MRM2

Species

M.oculata

Unique Gene ID

Moocul.g00012055

Gene Model ID

Moocul.CG.ELv1_2.S111548.g12055

Location

S111548:11750..14828

Transcript Models and Sequences

  Moocul.CG.ELv1_2.S111548.g12055.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term Analysis Definition
rRNA-MeTfrase_E PIRSF Ribosomal RNA large subunit methyltransferase E
SAM-dependent_MTases SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferase
rRNA_MeTrfase_FtsJ_dom Pfam Ribosomal RNA methyltransferase FtsJ domain
rRNA-MeTfrase_E Hamap Ribosomal RNA large subunit methyltransferase E

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

11 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
RNA methylation Hs biological process
nucleolus Hs cellular component
mitochondrion Hs cellular component
mitochondrial matrix Hs cellular component
rRNA processing Hs biological process
methyltransferase activity Hs molecular function
cell proliferation Hs biological process
rRNA (uridine-2'-O-)-methyltransferase activity Hs molecular function
transferase activity Hs molecular function
rRNA methylation Hs biological process
methylation Hs biological process

GO (Blast)

17 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
RNA binding Hs molecular function 91.3 6.04e-21
protein binding Hs molecular function 91.3 6.04e-21
nucleus Hs cellular component 91.3 6.04e-21
nucleolus Hs cellular component 164 2.66e-50
cytoplasm Hs cellular component 129 7.60e-36
mitochondrion Hs cellular component 164 2.66e-50
mitochondrial matrix Hs cellular component 164 2.66e-50
cytosol Hs cellular component 129 7.60e-36
methyltransferase activity Hs molecular function 164 2.66e-50
tRNA methyltransferase activity Hs molecular function 129 7.60e-36
rRNA methyltransferase activity Hs molecular function 91.3 6.04e-21
rRNA (uridine-2'-O-)-methyltransferase activity Hs molecular function 164 2.66e-50
tRNA (guanosine-2'-O-)-methyltransferase activity Hs molecular function 129 7.60e-36
rRNA (guanine) methyltransferase activity Hs molecular function 91.3 6.04e-21
transferase activity Hs molecular function 164 2.66e-50
preribosome, large subunit precursor Hs cellular component 91.3 6.04e-21
tRNA (cytosine-2'-O-)-methyltransferase activity Hs molecular function 129 7.60e-36

GO (InterProScan)

3 results

GO Term Analysis Type e-value
RNA methylation PIRSF biological process 1.7E-64
methyltransferase activity PIRSF molecular function 1.7E-64
methylation Pfam biological process 1.2E-53