Gene Card
Best human hits
MTREX; SKIV2L
Species
Unique Gene ID
Moocul.g00013719
Gene Model ID
Moocul.CG.ELv1_2.S114851.g13719
Location
S114851:68044..71152
Transcript Models and Sequences
n/a
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The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
InterPro
12 results
| IPR Term | Analysis | Definition |
|---|---|---|
| DEAD/DEAH_box_helicase_dom | Pfam | DEAD/DEAH box helicase domain |
| Helicase_C | Pfam | Helicase, C-terminal |
| Ski2-like | PIRSF | ATP-dependent RNA helicase Ski2-like |
| Helicase_C | ProSiteProfiles | Helicase, C-terminal |
| Helicase_C | SMART | Helicase, C-terminal |
| P-loop_NTPase | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolase |
| Helicase_ATP-bd | ProSiteProfiles | Helicase superfamily 1/2, ATP-binding domain |
| Ski2_C | Pfam | ATP-dependent RNA helicase Ski2, C-terminal |
| Ski2_C | SMART | ATP-dependent RNA helicase Ski2, C-terminal |
| Helicase_ATP-bd | SMART | Helicase superfamily 1/2, ATP-binding domain |
| rRNA_proc-arch_dom | Pfam | rRNA-processing arch domain |
| Helicase_C | CDD | Helicase, C-terminal |
| GO Term | Annotation Origin | Type |
|---|
GO (Orthology)
21 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|---|---|
| nucleotide binding | Hs | molecular function |
| exosome (RNase complex) | Hs | cellular component |
| mRNA splicing, via spliceosome | Hs | biological process |
| maturation of 5.8S rRNA | Hs | biological process |
| nucleic acid binding | Hs | molecular function |
| RNA binding | Hs | molecular function |
| RNA helicase activity | Hs | molecular function |
| ATP-dependent RNA helicase activity | Hs | molecular function |
| helicase activity | Hs | molecular function |
| protein binding | Hs | molecular function |
| ATP binding | Hs | molecular function |
| nucleus | Hs | cellular component |
| nucleoplasm | Hs | cellular component |
| spliceosomal complex | Hs | cellular component |
| nucleolus | Hs | cellular component |
| rRNA processing | Hs | biological process |
| mRNA processing | Hs | biological process |
| RNA catabolic process | Hs | biological process |
| RNA splicing | Hs | biological process |
| hydrolase activity | Hs | molecular function |
| catalytic step 2 spliceosome | Hs | cellular component |
GO (Blast)
18 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| nucleotide binding | Hs | molecular function | 1469 | 0.0 |
| exosome (RNase complex) | Hs | cellular component | 1469 | 0.0 |
| nucleic acid binding | Hs | molecular function | 1469 | 0.0 |
| RNA binding | Hs | molecular function | 1469 | 0.0 |
| RNA helicase activity | Hs | molecular function | 1469 | 0.0 |
| ATP-dependent RNA helicase activity | Hs | molecular function | 1469 | 0.0 |
| helicase activity | Hs | molecular function | 1469 | 0.0 |
| protein binding | Hs | molecular function | 1469 | 0.0 |
| ATP binding | Hs | molecular function | 1469 | 0.0 |
| nucleus | Hs | cellular component | 1469 | 0.0 |
| nucleoplasm | Hs | cellular component | 1469 | 0.0 |
| spliceosomal complex | Hs | cellular component | 1469 | 0.0 |
| nucleolus | Hs | cellular component | 1469 | 0.0 |
| cytoplasm | Hs | cellular component | 578 | 0.0 |
| cytosol | Hs | cellular component | 578 | 0.0 |
| hydrolase activity | Hs | molecular function | 1469 | 0.0 |
| Ski complex | Hs | cellular component | 578 | 0.0 |
| catalytic step 2 spliceosome | Hs | cellular component | 1469 | 0.0 |
GO (InterProScan)
5 results
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| nucleic acid binding | Pfam | molecular function | 5.0E-17 |
| RNA binding | PIRSF | molecular function | 0.0 |
| RNA helicase activity | PIRSF | molecular function | 0.0 |
| ATP binding | Pfam | molecular function | 5.0E-17 |
| RNA catabolic process | PIRSF | biological process | 0.0 |
