Login
Help

GENE CARD

Submit your Data

Gene Card

Best human hits

ABCF1; ABCF2; ABCF3

Species

M.oculata

Unique Gene ID

Moocul.g00014628

Gene Model ID

Moocul.CG.ELv1_2.S125316.g14628

Location

S125316:22994..30643

Transcript Models and Sequences

  Moocul.CG.ELv1_2.S125316.g14628.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

6 results

IPR Term Analysis Definition
ABC_transporter-like Pfam ABC transporter-like
P-loop_NTPase SUPERFAMILY P-loop containing nucleoside triphosphate hydrolase
ABC_transporter-like ProSiteProfiles ABC transporter-like
ABC_transporter_CS ProSitePatterns ABC transporter, conserved site
AAA+_ATPase SMART AAA+ ATPase domain
ABC_tran_Xtn Pfam ABC-transporter extension domain

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

7 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
nucleotide binding Hs molecular function
transporter activity Hs molecular function
ATP binding Hs molecular function
mitochondrial envelope Hs cellular component
membrane Hs cellular component
ATPase activity Hs molecular function
ATP-binding cassette (ABC) transporter complex Hs cellular component

GO (Blast)

17 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nucleotide binding Hs molecular function 864 0.0
RNA binding Hs molecular function 373 1.22e-118
transporter activity Hs molecular function 864 0.0
protein binding Hs molecular function 419 1.34e-137
ATP binding Hs molecular function 864 0.0
nucleus Hs cellular component 373 1.22e-118
nuclear envelope Hs cellular component 373 1.22e-118
nucleoplasm Hs cellular component 373 1.22e-118
cytoplasm Hs cellular component 373 1.22e-118
mitochondrial envelope Hs cellular component 864 0.0
cytosol Hs cellular component 373 1.22e-118
ribosome Hs cellular component 373 1.22e-118
translation factor activity, RNA binding Hs molecular function 373 1.22e-118
membrane Hs cellular component 864 0.0
ATPase activity Hs molecular function 864 0.0
ATP-binding cassette (ABC) transporter complex Hs cellular component 864 0.0
cadherin binding Hs molecular function 419 1.34e-137

GO (InterProScan)

2 results

GO Term Analysis Type e-value
ATP binding Pfam molecular function 2.6E-22
ATPase activity Pfam molecular function 2.6E-22