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GENE CARD

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  1. Pub 'PMID:18211956'

Gene Card

Best human hits

ATOH1; ATOH7; NEUROD1

Species

M.oculata

Unique Gene ID

Moocul.g00015078

Gene Model ID

Moocul.CG.ELv1_2.S128449.g15078

Location

S128449:6923..7242

Transcript Models and Sequences

  Moocul.CG.ELv1_2.S128449.g15078.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term Analysis Definition
HLH_DNA-bd_sf Gene3D Helix-loop-helix DNA-binding domain superfamily
bHLH_dom SMART Myc-type, basic helix-loop-helix (bHLH) domain
bHLH_dom ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain
bHLH_dom Pfam Myc-type, basic helix-loop-helix (bHLH) domain
HLH_DNA-bd_sf SUPERFAMILY Helix-loop-helix DNA-binding domain superfamily
bHLH_dom CDD Myc-type, basic helix-loop-helix (bHLH) domain

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

14 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function
neural retina development Hs biological process
DNA binding Hs molecular function
nucleus Hs cellular component
transcription, DNA-templated Hs biological process
regulation of transcription, DNA-templated Hs biological process
regulation of transcription from RNA polymerase II promoter Hs biological process
multicellular organism development Hs biological process
nervous system development Hs biological process
circadian rhythm Hs biological process
entrainment of circadian clock Hs biological process
optic nerve development Hs biological process
cell differentiation Hs biological process
protein dimerization activity Hs molecular function

GO (Blast)

22 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
RNA polymerase II core promoter proximal region sequence-specific DNA binding Hs molecular function 60.8 1.17e-12
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function 67.4 5.79e-16
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding Hs molecular function 60.8 1.17e-12
RNA polymerase II activating transcription factor binding Hs molecular function 55.1 1.07e-10
RNA polymerase II transcription coactivator activity Hs molecular function 55.1 1.07e-10
DNA binding Hs molecular function 67.4 5.79e-16
chromatin binding Hs molecular function 55.1 1.07e-10
double-stranded DNA binding Hs molecular function 55.1 1.07e-10
transcription factor activity, sequence-specific DNA binding Hs molecular function 60.8 1.17e-12
transcription coactivator activity Hs molecular function 55.1 1.07e-10
protein binding Hs molecular function 55.1 1.07e-10
intracellular Hs cellular component 55.1 1.07e-10
nucleus Hs cellular component 67.4 5.79e-16
nucleoplasm Hs cellular component 55.1 1.07e-10
cytoplasm Hs cellular component 55.1 1.07e-10
transcription factor binding Hs molecular function 55.1 1.07e-10
chromatin DNA binding Hs molecular function 60.8 1.17e-12
sequence-specific DNA binding Hs molecular function 60.8 1.17e-12
protein heterodimerization activity Hs molecular function 55.1 1.07e-10
protein dimerization activity Hs molecular function 67.4 5.79e-16
E-box binding Hs molecular function 55.1 1.07e-10
RNA polymerase II transcription factor complex Hs cellular component 55.1 1.07e-10

GO (InterProScan)

1 result

GO Term Analysis Type e-value
protein dimerization activity Gene3D molecular function 1.8E-15