Aniseed - Gene card

Gene Card

Best human hits

IRX3; IRX4; IRX6

Species

M.oculata

Unique Gene ID

Moocul.g00000958

Gene Model ID

Moocul.CG.ELv1_2.S24038.g00958

Location

S24038:31776..36001

Transcript Models and Sequences

Moocul.CG.ELv1_2.S24038.g00958.01.t

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

7 results

IPR Term	Analysis	Definition
Homeobox_KN_domain	Pfam	Homeobox KN domain
Homeobox_CS	ProSitePatterns	Homeobox, conserved site
Homeobox_dom	ProSiteProfiles	Homeobox domain
Homeobox-like_sf	SUPERFAMILY	Homeobox-like domain superfamily
Homeobox_dom	CDD	Homeobox domain
Iroquois_homeo	SMART	Iroquois-class homeodomain protein
Homeobox_dom	SMART	Homeobox domain

GOSlim

No result

GO Term	Annotation Origin	Type

GO (Orthology)

15 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Hs	molecular function
DNA binding	Hs	molecular function
nucleus	Hs	cellular component
cytoplasm	Hs	cellular component
transcription, DNA-templated	Hs	biological process
regulation of transcription, DNA-templated	Hs	biological process
regulation of transcription from RNA polymerase II promoter	Hs	biological process
multicellular organism development	Hs	biological process
mesoderm development	Hs	biological process
axon	Hs	cellular component
sequence-specific DNA binding	Hs	molecular function
negative regulation of neuron differentiation	Hs	biological process
positive regulation of neuron differentiation	Hs	biological process
negative regulation of transcription from RNA polymerase II promoter	Hs	biological process
transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific binding	Hs	molecular function

GO (Blast)

6 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Hs	molecular function	186	1.56e-52
DNA binding	Hs	molecular function	186	1.56e-52
nucleus	Hs	cellular component	186	1.56e-52
cytoplasm	Hs	cellular component	150	3.63e-39
axon	Hs	cellular component	150	3.63e-39
sequence-specific DNA binding	Hs	molecular function	186	1.56e-52

GO (InterProScan)

4 results

GO Term	Analysis	Type	e-value
DNA binding	SUPERFAMILY	molecular function	1.67E-17
nucleus	SMART	cellular component	1.6E-4
regulation of transcription, DNA-templated	Pfam	biological process	1.7E-15
sequence-specific DNA binding	ProSitePatterns	molecular function