Login
Help

GENE CARD

Submit your Data

Gene Card

Best human hits

SMCHD1

Species

M.oculata

Unique Gene ID

Moocul.g00001091

Gene Model ID

Moocul.CG.ELv1_2.S25117.g01091

Location

S25117:36583..42616

Transcript Models and Sequences

  Moocul.CG.ELv1_2.S25117.g01091.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
HATPase_C CDD Histidine kinase/HSP90-like ATPase
SMC_hinge_sf SUPERFAMILY SMCs flexible hinge superfamily
SMC_hinge SMART SMCs flexible hinge
HATPase_C_sf SUPERFAMILY Histidine kinase/HSP90-like ATPase superfamily
HATPase_C_sf Gene3D Histidine kinase/HSP90-like ATPase superfamily

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

8 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
nuclear chromosome, telomeric region Hs cellular component
Barr body Hs cellular component
protein binding Hs molecular function
ATP binding Hs molecular function
chromosome Hs cellular component
ATPase activity Hs molecular function
nose development Hs biological process
chromosome organization Hs biological process

GO (Blast)

6 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nuclear chromosome, telomeric region Hs cellular component 1390 0.0
Barr body Hs cellular component 1390 0.0
protein binding Hs molecular function 1390 0.0
ATP binding Hs molecular function 1390 0.0
chromosome Hs cellular component 1390 0.0
ATPase activity Hs molecular function 1390 0.0

GO (InterProScan)

4 results

GO Term Analysis Type e-value
protein binding SUPERFAMILY molecular function 8.63E-13
ATP binding SUPERFAMILY molecular function 8.63E-13
chromosome SUPERFAMILY cellular component 8.63E-13
chromosome organization SUPERFAMILY biological process 8.63E-13