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GENE CARD

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Gene Card

Best human hits

RPL3; RPL3L

Species

M.oculata

Unique Gene ID

Moocul.g00001428

Gene Model ID

Moocul.CG.ELv1_2.S30190.g01428

Location

S30190:2453..6354

Transcript Models and Sequences

  Moocul.CG.ELv1_2.S30190.g01428.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

3 results

IPR Term Analysis Definition
Transl_B-barrel_sf SUPERFAMILY Translation protein, beta-barrel domain superfamily
Ribosomal_L3 Pfam Ribosomal protein L3
Ribosomal_L3_CS ProSitePatterns Ribosomal protein L3, conserved site

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

22 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
ribosomal large subunit assembly Hs biological process
nuclear-transcribed mRNA catabolic process, nonsense-mediated decay Hs biological process
RNA binding Hs molecular function
structural constituent of ribosome Hs molecular function
protein binding Hs molecular function
intracellular Hs cellular component
nucleus Hs cellular component
nucleolus Hs cellular component
cytoplasm Hs cellular component
cytosol Hs cellular component
ribosome Hs cellular component
focal adhesion Hs cellular component
rRNA processing Hs biological process
translation Hs biological process
translational initiation Hs biological process
SRP-dependent cotranslational protein targeting to membrane Hs biological process
5S rRNA binding Hs molecular function
membrane Hs cellular component
cytosolic large ribosomal subunit Hs cellular component
intracellular ribonucleoprotein complex Hs cellular component
macromolecular complex Hs cellular component
extracellular exosome Hs cellular component

GO (Blast)

16 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
RNA binding Hs molecular function 659 0.0
structural constituent of ribosome Hs molecular function 659 0.0
protein binding Hs molecular function 659 0.0
intracellular Hs cellular component 659 0.0
nucleus Hs cellular component 659 0.0
nucleolus Hs cellular component 659 0.0
cytoplasm Hs cellular component 659 0.0
cytosol Hs cellular component 659 0.0
ribosome Hs cellular component 659 0.0
focal adhesion Hs cellular component 659 0.0
5S rRNA binding Hs molecular function 659 0.0
membrane Hs cellular component 585 0.0
cytosolic large ribosomal subunit Hs cellular component 659 0.0
intracellular ribonucleoprotein complex Hs cellular component 659 0.0
macromolecular complex Hs cellular component 659 0.0
extracellular exosome Hs cellular component 659 0.0

GO (InterProScan)

4 results

GO Term Analysis Type e-value
structural constituent of ribosome Pfam molecular function 1.4E-175
intracellular Pfam cellular component 1.4E-175
ribosome Pfam cellular component 1.4E-175
translation Pfam biological process 1.4E-175