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GENE CARD

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Gene Card

Best human hits

ZMAT3; ZMAT4; ZNF346

Species

M.oculata

Unique Gene ID

Moocul.g00001776

Gene Model ID

Moocul.CG.ELv1_2.S35834.g01776

Location

S35834:653..2285

Transcript Models and Sequences

  Moocul.CG.ELv1_2.S35834.g01776.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term Analysis Definition
Znf_C2H2_sf SUPERFAMILY Zinc finger C2H2 superfamily
Matrin/U1-like-C_Znf_C2H2 SMART Matrin/U1-C-like, C2H2-type zinc finger
Znf_C2H2_type SMART Zinc finger C2H2-type
Znf_C2H2_type ProSitePatterns Zinc finger C2H2-type

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

15 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
p53 binding Hs molecular function 91.7 1.90e-20
nucleic acid binding Hs molecular function 91.7 1.90e-20
DNA binding Hs molecular function 58.2 1.80e-09
RNA binding Hs molecular function 91.7 1.90e-20
double-stranded RNA binding Hs molecular function 50.8 9.01e-07
protein binding Hs molecular function 91.7 1.90e-20
nucleus Hs cellular component 91.7 1.90e-20
nucleoplasm Hs cellular component 91.7 1.90e-20
nucleolus Hs cellular component 91.7 1.90e-20
cytoplasm Hs cellular component 50.8 9.01e-07
plasma membrane Hs cellular component 91.7 1.90e-20
zinc ion binding Hs molecular function 91.7 1.90e-20
enzyme binding Hs molecular function 50.8 9.01e-07
miRNA binding Hs molecular function 50.8 9.01e-07
metal ion binding Hs molecular function 91.7 1.90e-20

GO (InterProScan)

2 results

GO Term Analysis Type e-value
nucleic acid binding SMART molecular function 1.6E-5
zinc ion binding SMART molecular function 1.6E-5