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GENE CARD

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Gene Card

Best human hits

THBS1; THBS2; THBS3

Species

M.oculata

Unique Gene ID

Moocul.g00002134

Gene Model ID

Moocul.CG.ELv1_2.S41904.g02134

Location

S41904:11478..17491

Transcript Models and Sequences

  Moocul.CG.ELv1_2.S41904.g02134.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

20 results

IPR Term Analysis Definition
VWF_dom SMART VWFC domain
TSP1_rpt_sf Gene3D Thrombospondin type-1 (TSP1) repeat superfamily
TSP1_rpt ProSiteProfiles Thrombospondin type-1 (TSP1) repeat
EGF-like_dom SMART EGF-like domain
TSP1_rpt_sf SUPERFAMILY Thrombospondin type-1 (TSP1) repeat superfamily
Thrombospondin PANTHER Thrombospondin
EGF-like_Ca-bd_dom SMART EGF-like calcium-binding domain
Thrombospondin_C ProSiteProfiles Thrombospondin, C-terminal
Thrombospondin_3_rpt ProSiteProfiles Thrombospondin, type 3 repeat
TSP_type-3_rpt SUPERFAMILY TSP type-3 repeat
TSP1_rpt SMART Thrombospondin type-1 (TSP1) repeat
VWF_dom ProSiteProfiles VWFC domain
VWF_dom ProSitePatterns VWFC domain
ConA-like_dom_sf SUPERFAMILY Concanavalin A-like lectin/glucanase domain superfamily
Laminin_G SMART Laminin G domain
Thrombospondin_C Pfam Thrombospondin, C-terminal
Thrombospondin_3-like_rpt Pfam Thrombospondin, type 3-like repeat
TSP_type-3_rpt Gene3D TSP type-3 repeat
VWF_dom Pfam VWFC domain
TSP1_rpt Pfam Thrombospondin type-1 (TSP1) repeat

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

75 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
activation of MAPK activity Hs biological process
response to hypoxia Hs biological process
phosphatidylserine binding Hs molecular function
fibronectin binding Hs molecular function
sprouting angiogenesis Hs biological process
platelet degranulation Hs biological process
integrin binding Hs molecular function
calcium ion binding Hs molecular function
protein binding Hs molecular function
extracellular region Hs cellular component
fibrinogen complex Hs cellular component
proteinaceous extracellular matrix Hs cellular component
basement membrane Hs cellular component
extracellular space Hs cellular component
cytoplasm Hs cellular component
endoplasmic reticulum Hs cellular component
endoplasmic reticulum lumen Hs cellular component
inflammatory response Hs biological process
immune response Hs biological process
response to unfolded protein Hs biological process
cell cycle arrest Hs biological process
cell adhesion Hs biological process
heparin binding Hs molecular function
positive regulation of cell proliferation Hs biological process
response to mechanical stimulus Hs biological process
response to glucose Hs biological process
external side of plasma membrane Hs cellular component
cell surface Hs cellular component
negative regulation of cGMP-mediated signaling Hs biological process
negative regulation of plasminogen activation Hs biological process
cell migration Hs biological process
negative regulation of angiogenesis Hs biological process
sarcoplasmic reticulum Hs cellular component
fibroblast growth factor binding Hs molecular function
peptide cross-linking Hs biological process
secretory granule Hs cellular component
low-density lipoprotein particle binding Hs molecular function
positive regulation of blood coagulation Hs biological process
extracellular matrix organization Hs biological process
positive regulation of cell migration Hs biological process
positive regulation of transforming growth factor beta receptor signaling pathway Hs biological process
extracellular matrix Hs cellular component
platelet alpha granule Hs cellular component
platelet alpha granule lumen Hs cellular component
response to magnesium ion Hs biological process
response to progesterone Hs biological process
cellular response to heat Hs biological process
response to endoplasmic reticulum stress Hs biological process
protein O-linked fucosylation Hs biological process
negative regulation of fibroblast growth factor receptor signaling pathway Hs biological process
positive regulation of phosphorylation Hs biological process
response to drug Hs biological process
identical protein binding Hs molecular function
negative regulation of apoptotic process Hs biological process
negative regulation of cysteine-type endopeptidase activity involved in apoptotic process Hs biological process
laminin binding Hs molecular function
proteoglycan binding Hs molecular function
negative regulation of blood vessel endothelial cell migration Hs biological process
engulfment of apoptotic cell Hs biological process
positive regulation of translation Hs biological process
positive regulation of angiogenesis Hs biological process
behavioral response to pain Hs biological process
transforming growth factor beta binding Hs molecular function
extracellular matrix binding Hs molecular function
positive regulation of chemotaxis Hs biological process
response to calcium ion Hs biological process
negative regulation of focal adhesion assembly Hs biological process
positive regulation of protein kinase B signaling Hs biological process
positive regulation of synapse assembly Hs biological process
fibrinogen binding Hs molecular function
collagen V binding Hs molecular function
extracellular exosome Hs cellular component
cellular response to tumor necrosis factor Hs biological process
positive regulation of reactive oxygen species metabolic process Hs biological process
negative regulation of extrinsic apoptotic signaling pathway Hs biological process

GO (Blast)

32 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
phosphatidylserine binding Hs molecular function 930 0.0
fibronectin binding Hs molecular function 930 0.0
integrin binding Hs molecular function 930 0.0
calcium ion binding Hs molecular function 961 0.0
protein binding Hs molecular function 961 0.0
extracellular region Hs cellular component 961 0.0
fibrinogen complex Hs cellular component 930 0.0
proteinaceous extracellular matrix Hs cellular component 961 0.0
basement membrane Hs cellular component 961 0.0
extracellular space Hs cellular component 961 0.0
cytoplasm Hs cellular component 930 0.0
endoplasmic reticulum Hs cellular component 930 0.0
endoplasmic reticulum lumen Hs cellular component 930 0.0
heparin binding Hs molecular function 961 0.0
external side of plasma membrane Hs cellular component 930 0.0
cell surface Hs cellular component 930 0.0
sarcoplasmic reticulum Hs cellular component 930 0.0
fibroblast growth factor binding Hs molecular function 930 0.0
secretory granule Hs cellular component 930 0.0
low-density lipoprotein particle binding Hs molecular function 930 0.0
extracellular matrix Hs cellular component 961 0.0
platelet alpha granule Hs cellular component 961 0.0
platelet alpha granule lumen Hs cellular component 930 0.0
identical protein binding Hs molecular function 930 0.0
laminin binding Hs molecular function 930 0.0
proteoglycan binding Hs molecular function 930 0.0
perinuclear region of cytoplasm Hs cellular component 574 0.0
transforming growth factor beta binding Hs molecular function 930 0.0
extracellular matrix binding Hs molecular function 930 0.0
fibrinogen binding Hs molecular function 930 0.0
collagen V binding Hs molecular function 930 0.0
extracellular exosome Hs cellular component 930 0.0

GO (InterProScan)

6 results

GO Term Analysis Type e-value
calcium ion binding Pfam molecular function 2.0E-87
protein binding SMART molecular function 1.8E-9
extracellular region Pfam cellular component 2.0E-87
cell adhesion Pfam biological process 2.0E-87
extracellular matrix organization PANTHER biological process 0.0
extracellular matrix PANTHER cellular component 0.0

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