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GENE CARD

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  1. Gene 'Moocul.CG.ELv1_2.S45...'

Gene Card

Best human hits

FYCO1; PMFBP1; USO1

Species

M.oculata

Unique Gene ID

Moocul.g00002399

Gene Model ID

Moocul.CG.ELv1_2.S45137.g02399

Location

S45137:3450..6210

Transcript Models and Sequences

  Moocul.CG.ELv1_2.S45137.g02399.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term Analysis Definition
ARM-like Gene3D Armadillo-like helical
Uso1_p115_C Pfam Uso1/p115-like vesicle tethering protein, C-terminal
Vesicle_Uso1_P115_head Pfam Vesicle tethering protein Uso1/P115-like , head domain
ARM-type_fold SUPERFAMILY Armadillo-type fold

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

26 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
Golgi membrane Hs cellular component
fibrillar center Hs cellular component
RNA binding Hs molecular function
binding Hs molecular function
protein binding Hs molecular function
cytoplasm Hs cellular component
endoplasmic reticulum Hs cellular component
Golgi apparatus Hs cellular component
Golgi stack Hs cellular component
cytosol Hs cellular component
intracellular protein transport Hs biological process
ER to Golgi vesicle-mediated transport Hs biological process
Golgi organization Hs biological process
protein transporter activity Hs molecular function
ER to Golgi transport vesicle membrane Hs cellular component
protein transport Hs biological process
membrane Hs cellular component
vesicle-mediated transport Hs biological process
transport vesicle Hs cellular component
transcytosis Hs biological process
cadherin binding Hs molecular function
COPII vesicle coating Hs biological process
Golgi vesicle docking Hs biological process
vesicle fusion with Golgi apparatus Hs biological process
perinuclear region of cytoplasm Hs cellular component
membrane fusion Hs biological process

GO (Blast)

26 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
Golgi membrane Hs cellular component 758 0.0
fibrillar center Hs cellular component 758 0.0
RNA binding Hs molecular function 758 0.0
binding Hs molecular function 758 0.0
protein binding Hs molecular function 758 0.0
ATP binding Hs molecular function 41.6 0.002
cytoplasm Hs cellular component 758 0.0
lysosome Hs cellular component 41.6 0.002
endosome Hs cellular component 41.6 0.002
late endosome Hs cellular component 41.6 0.002
autophagosome Hs cellular component 41.6 0.002
endoplasmic reticulum Hs cellular component 758 0.0
Golgi apparatus Hs cellular component 758 0.0
Golgi stack Hs cellular component 758 0.0
cytosol Hs cellular component 758 0.0
protein transporter activity Hs molecular function 758 0.0
ER to Golgi transport vesicle membrane Hs cellular component 758 0.0
membrane Hs cellular component 758 0.0
transport vesicle Hs cellular component 758 0.0
cytoplasmic vesicle Hs cellular component 41.6 0.002
intracellular membrane-bounded organelle Hs cellular component 41.6 0.002
protein binding involved in protein folding Hs molecular function 41.6 0.002
cadherin binding Hs molecular function 758 0.0
metal ion binding Hs molecular function 41.6 0.002
perinuclear region of cytoplasm Hs cellular component 758 0.0
unfolded protein binding Hs molecular function 41.6 0.002

GO (InterProScan)

7 results

GO Term Analysis Type e-value
Golgi membrane Pfam cellular component 8.9E-50
binding SUPERFAMILY molecular function 4.22E-21
cytoplasm Pfam cellular component 8.9E-50
intracellular protein transport Pfam biological process 8.9E-50
protein transporter activity Pfam molecular function 6.8E-13
membrane Pfam cellular component 6.8E-13
vesicle fusion with Golgi apparatus Pfam biological process 8.9E-50