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GENE CARD

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Gene Card

Best human hits

COPA; COPB2; PAFAH1B1

Species

M.oculata

Unique Gene ID

Moocul.g00002926

Gene Model ID

Moocul.CG.ELv1_2.S51260.g02926

Location

S51260:1051..10062

Transcript Models and Sequences

  Moocul.CG.ELv1_2.S51260.g02926.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

10 results

IPR Term Analysis Definition
WD40/YVTN_repeat-like_dom_sf Gene3D WD40/YVTN repeat-like-containing domain superfamily
WD40_repeat_dom_sf SUPERFAMILY WD40-repeat-containing domain superfamily
WD40_repeat Pfam WD40 repeat
WD40_repeat SMART WD40 repeat
WD40_repeat ProSiteProfiles WD40 repeat
COPB2 PIRSF Coatomer beta' subunit (COPB2)
G-protein_beta_WD-40_rep PRINTS G-protein beta WD-40 repeat
WD40_repeat_dom ProSiteProfiles WD40-repeat-containing domain
Quino_amine_DH_bsu SUPERFAMILY Quinoprotein amine dehydrogenase, beta chain-like
Coatomer_WD-assoc_reg Pfam Coatomer, WD associated region

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

20 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
Golgi membrane Hs cellular component
structural molecule activity Hs molecular function
protein binding Hs molecular function
cytoplasm Hs cellular component
endoplasmic reticulum membrane Hs cellular component
Golgi apparatus Hs cellular component
cytosol Hs cellular component
intracellular protein transport Hs biological process
ER to Golgi vesicle-mediated transport Hs biological process
retrograde vesicle-mediated transport, Golgi to ER Hs biological process
intra-Golgi vesicle-mediated transport Hs biological process
protein transport Hs biological process
membrane Hs cellular component
vesicle-mediated transport Hs biological process
membrane coat Hs cellular component
COPI vesicle coat Hs cellular component
transport vesicle Hs cellular component
COPI-coated vesicle membrane Hs cellular component
cytoplasmic vesicle Hs cellular component
toxin transport Hs biological process

GO (Blast)

51 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
Golgi membrane Hs cellular component 1439 0.0
astral microtubule Hs cellular component 112 2.89e-26
kinetochore Hs cellular component 112 2.89e-26
phospholipase A2 activity Hs molecular function 112 2.89e-26
hormone activity Hs molecular function 254 3.85e-70
structural molecule activity Hs molecular function 1439 0.0
protein binding Hs molecular function 1439 0.0
extracellular region Hs cellular component 254 3.85e-70
extracellular space Hs cellular component 254 3.85e-70
nucleus Hs cellular component 112 2.89e-26
nuclear envelope Hs cellular component 112 2.89e-26
cytoplasm Hs cellular component 1439 0.0
endoplasmic reticulum membrane Hs cellular component 1439 0.0
Golgi apparatus Hs cellular component 1439 0.0
centrosome Hs cellular component 112 2.89e-26
microtubule organizing center Hs cellular component 112 2.89e-26
spindle Hs cellular component 112 2.89e-26
cytosol Hs cellular component 1439 0.0
cytoskeleton Hs cellular component 112 2.89e-26
kinesin complex Hs cellular component 112 2.89e-26
microtubule Hs cellular component 112 2.89e-26
microtubule associated complex Hs cellular component 112 2.89e-26
cell cortex Hs cellular component 112 2.89e-26
microtubule binding Hs molecular function 112 2.89e-26
heparin binding Hs molecular function 112 2.89e-26
microtubule cytoskeleton Hs cellular component 112 2.89e-26
membrane Hs cellular component 1439 0.0
membrane coat Hs cellular component 1439 0.0
COPI vesicle coat Hs cellular component 1439 0.0
transport vesicle Hs cellular component 1439 0.0
axon Hs cellular component 112 2.89e-26
growth cone Hs cellular component 112 2.89e-26
COPI-coated vesicle membrane Hs cellular component 1439 0.0
cell leading edge Hs cellular component 112 2.89e-26
cytoplasmic vesicle Hs cellular component 1439 0.0
motile cilium Hs cellular component 112 2.89e-26
nuclear membrane Hs cellular component 112 2.89e-26
vesicle Hs cellular component 112 2.89e-26
stereocilium Hs cellular component 112 2.89e-26
dynactin binding Hs molecular function 112 2.89e-26
protein homodimerization activity Hs molecular function 112 2.89e-26
neuron projection Hs cellular component 112 2.89e-26
neuronal cell body Hs cellular component 112 2.89e-26
phospholipase binding Hs molecular function 112 2.89e-26
dynein intermediate chain binding Hs molecular function 112 2.89e-26
perinuclear region of cytoplasm Hs cellular component 112 2.89e-26
phosphoprotein binding Hs molecular function 112 2.89e-26
extracellular exosome Hs cellular component 254 3.85e-70
dynein complex binding Hs molecular function 112 2.89e-26
central region of growth cone Hs cellular component 112 2.89e-26
axon cytoplasm Hs cellular component 112 2.89e-26

GO (InterProScan)

5 results

GO Term Analysis Type e-value
structural molecule activity Pfam molecular function 2.3E-168
protein binding Gene3D molecular function 2.3E-110
intracellular protein transport Pfam biological process 2.3E-168
vesicle-mediated transport Pfam biological process 2.3E-168
membrane coat Pfam cellular component 2.3E-168

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