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GENE CARD

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Gene Card

Best human hits

DDX6; EIF4A2; EIF4A3

Species

M.oculata

Unique Gene ID

Moocul.g00002978

Gene Model ID

Moocul.CG.ELv1_2.S51598.g02978

Location

S51598:14190..18615

Transcript Models and Sequences

  Moocul.CG.ELv1_2.S51598.g02978.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

9 results

IPR Term Analysis Definition
RNA_helicase_DEAD_Q_motif ProSiteProfiles RNA helicase, DEAD-box type, Q motif
Helicase_C SMART Helicase, C-terminal
Helicase_C Pfam Helicase, C-terminal
Helicase_C ProSiteProfiles Helicase, C-terminal
Helicase_C CDD Helicase, C-terminal
P-loop_NTPase SUPERFAMILY P-loop containing nucleoside triphosphate hydrolase
Helicase_ATP-bd SMART Helicase superfamily 1/2, ATP-binding domain
DEAD/DEAH_box_helicase_dom Pfam DEAD/DEAH box helicase domain
Helicase_ATP-bd ProSiteProfiles Helicase superfamily 1/2, ATP-binding domain

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

32 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
nucleotide binding Hs molecular function
heterochromatin Hs cellular component
P-body Hs cellular component
outer dense fiber Hs cellular component
nucleic acid binding Hs molecular function
RNA binding Hs molecular function
RNA helicase activity Hs molecular function
ATP-dependent RNA helicase activity Hs molecular function
helicase activity Hs molecular function
protein binding Hs molecular function
ATP binding Hs molecular function
nucleus Hs cellular component
nucleolus Hs cellular component
cytoplasm Hs cellular component
mitochondrion Hs cellular component
cytosol Hs cellular component
regulation of translation Hs biological process
spermatogenesis Hs biological process
cytoplasmic stress granule Hs cellular component
RNA secondary structure unwinding Hs biological process
membrane Hs cellular component
RISC complex Hs cellular component
hydrolase activity Hs molecular function
stem cell population maintenance Hs biological process
protein domain specific binding Hs molecular function
cytoplasmic mRNA processing body assembly Hs biological process
cytoplasmic ribonucleoprotein granule Hs cellular component
P granule Hs cellular component
exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay Hs biological process
cadherin binding Hs molecular function
negative regulation of neuron differentiation Hs biological process
sperm annulus Hs cellular component

GO (Blast)

42 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
nucleotide binding Hs molecular function 675 0.0
heterochromatin Hs cellular component 675 0.0
P-body Hs cellular component 675 0.0
outer dense fiber Hs cellular component 675 0.0
nucleic acid binding Hs molecular function 675 0.0
RNA binding Hs molecular function 675 0.0
RNA helicase activity Hs molecular function 675 0.0
mRNA binding Hs molecular function 277 8.44e-89
translation initiation factor activity Hs molecular function 251 6.43e-79
ATP-dependent RNA helicase activity Hs molecular function 675 0.0
helicase activity Hs molecular function 675 0.0
protein binding Hs molecular function 675 0.0
ATP binding Hs molecular function 675 0.0
nucleus Hs cellular component 675 0.0
nucleoplasm Hs cellular component 277 8.44e-89
spliceosomal complex Hs cellular component 277 8.44e-89
nucleolus Hs cellular component 675 0.0
cytoplasm Hs cellular component 675 0.0
mitochondrion Hs cellular component 675 0.0
cytosol Hs cellular component 675 0.0
poly(A) binding Hs molecular function 277 8.44e-89
cytoplasmic stress granule Hs cellular component 675 0.0
membrane Hs cellular component 675 0.0
eukaryotic translation initiation factor 4F complex Hs cellular component 251 6.43e-79
RISC complex Hs cellular component 675 0.0
nuclear speck Hs cellular component 277 8.44e-89
hydrolase activity Hs molecular function 675 0.0
ATPase activity Hs molecular function 251 6.43e-79
protein domain specific binding Hs molecular function 675 0.0
dendrite Hs cellular component 277 8.44e-89
intracellular ribonucleoprotein complex Hs cellular component 277 8.44e-89
exon-exon junction complex Hs cellular component 277 8.44e-89
selenocysteine insertion sequence binding Hs molecular function 277 8.44e-89
RNA stem-loop binding Hs molecular function 277 8.44e-89
cytoplasmic ribonucleoprotein granule Hs cellular component 675 0.0
ribonucleoprotein complex binding Hs molecular function 277 8.44e-89
neuronal cell body Hs cellular component 277 8.44e-89
P granule Hs cellular component 675 0.0
cadherin binding Hs molecular function 675 0.0
perinuclear region of cytoplasm Hs cellular component 251 6.43e-79
catalytic step 2 spliceosome Hs cellular component 277 8.44e-89
sperm annulus Hs cellular component 675 0.0

GO (InterProScan)

2 results

GO Term Analysis Type e-value
nucleic acid binding Pfam molecular function 1.9E-40
ATP binding Pfam molecular function 1.9E-40

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