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GENE CARD

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Gene Card

Best human hits

FTSJ1; FTSJ3; MRM2

Species

M.oculata

Unique Gene ID

Moocul.g00003140

Gene Model ID

Moocul.CG.ELv1_2.S53371.g03140

Location

S53371:9950..13022

Transcript Models and Sequences

  Moocul.CG.ELv1_2.S53371.g03140.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
RNA_methyltr_E_Trm7 PANTHER tRNA (cytidine(32)/guanosine(34)-2-O)-methyltransferase, Trm7
rRNA_MeTrfase_FtsJ_dom Pfam Ribosomal RNA methyltransferase FtsJ domain
RNA_methyltr_E_Trm7 Hamap tRNA (cytidine(32)/guanosine(34)-2-O)-methyltransferase, Trm7
rRNA-MeTfrase_E Hamap Ribosomal RNA large subunit methyltransferase E
SAM-dependent_MTases SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferase

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

13 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
RNA methylation Hs biological process
cytoplasmic translation Hs biological process
cytoplasm Hs cellular component
cytosol Hs cellular component
tRNA modification Hs biological process
tRNA processing Hs biological process
methyltransferase activity Hs molecular function
tRNA methyltransferase activity Hs molecular function
tRNA (guanosine-2'-O-)-methyltransferase activity Hs molecular function
transferase activity Hs molecular function
tRNA methylation Hs biological process
methylation Hs biological process
tRNA (cytosine-2'-O-)-methyltransferase activity Hs molecular function

GO (Blast)

17 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
RNA binding Hs molecular function 147 1.18e-39
protein binding Hs molecular function 147 1.18e-39
nucleus Hs cellular component 147 1.18e-39
nucleolus Hs cellular component 147 1.18e-39
cytoplasm Hs cellular component 398 3.98e-140
mitochondrion Hs cellular component 108 6.19e-28
mitochondrial matrix Hs cellular component 108 6.19e-28
cytosol Hs cellular component 398 3.98e-140
methyltransferase activity Hs molecular function 398 3.98e-140
tRNA methyltransferase activity Hs molecular function 398 3.98e-140
rRNA methyltransferase activity Hs molecular function 147 1.18e-39
rRNA (uridine-2'-O-)-methyltransferase activity Hs molecular function 147 1.18e-39
tRNA (guanosine-2'-O-)-methyltransferase activity Hs molecular function 398 3.98e-140
rRNA (guanine) methyltransferase activity Hs molecular function 147 1.18e-39
transferase activity Hs molecular function 398 3.98e-140
preribosome, large subunit precursor Hs cellular component 147 1.18e-39
tRNA (cytosine-2'-O-)-methyltransferase activity Hs molecular function 398 3.98e-140

GO (InterProScan)

5 results

GO Term Analysis Type e-value
RNA methylation Hamap biological process 31.134
tRNA processing PANTHER biological process 1.7E-136
methyltransferase activity Pfam molecular function 1.6E-65
tRNA methyltransferase activity PANTHER molecular function 1.7E-136
methylation Pfam biological process 1.6E-65