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GENE CARD

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  1. Pub 'PMID:16705435'
  2. Pub 'PMID:26258298'
  3. Pub 'PMID:15013810'
  4. Pub 'PMID:25576927'
  5. Gene 'Moocul.CG.ELv1_2.S57...'

Gene Card

Best human hits

COL12A1; COL21A1; MATN2

Species

M.oculata

Unique Gene ID

Moocul.g00003534

Gene Model ID

Moocul.CG.ELv1_2.S57799.g03534

Location

S57799:15754..18461

Transcript Models and Sequences

  Moocul.CG.ELv1_2.S57799.g03534.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

10 results

IPR Term Analysis Definition
vWFA_dom_sf Gene3D von Willebrand factor A-like domain superfamily
FG-GAP Pfam FG-GAP repeat
Int_alpha_beta-p ProSiteProfiles Integrin alpha beta-propellor
VWF_A Pfam von Willebrand factor, type A
Int_alpha_beta-p SMART Integrin alpha beta-propellor
Integrin_alpha PRINTS Integrin alpha chain
VWF_A ProSiteProfiles von Willebrand factor, type A
VWF_A SMART von Willebrand factor, type A
Integrin_alpha_N Gene3D Integrin alpha, N-terminal
vWFA_dom_sf SUPERFAMILY von Willebrand factor A-like domain superfamily

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

15 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
calcium ion binding Hs molecular function 122 9.88e-30
protein binding Hs molecular function 126 6.86e-31
extracellular region Hs cellular component 126 6.86e-31
proteinaceous extracellular matrix Hs cellular component 126 6.86e-31
collagen trimer Hs cellular component 126 6.86e-31
collagen type XII trimer Hs cellular component 126 6.86e-31
basement membrane Hs cellular component 122 9.88e-30
extracellular space Hs cellular component 126 6.86e-31
cytoplasm Hs cellular component 123 5.91e-30
endoplasmic reticulum lumen Hs cellular component 126 6.86e-31
cytosol Hs cellular component 123 5.91e-30
extracellular matrix structural constituent conferring tensile strength Hs molecular function 126 6.86e-31
extracellular matrix Hs cellular component 126 6.86e-31
extracellular exosome Hs cellular component 126 6.86e-31
extracellular vesicle Hs cellular component 126 6.86e-31

GO (InterProScan)

2 results

GO Term Analysis Type e-value
cell adhesion PRINTS biological process 1.3E-10
integrin complex PRINTS cellular component 1.3E-10