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GENE CARD

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Gene Card

Best human hits

LDB3; PDLIM3; PDLIM7

Species

M.oculata

Unique Gene ID

Moocul.g00003709

Gene Model ID

Moocul.CG.ELv1_2.S59369.g03709

Location

S59369:74075..76236

Transcript Models and Sequences

  Moocul.CG.ELv1_2.S59369.g03709.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term Analysis Definition
PDZ SMART PDZ domain
PDZ Pfam PDZ domain
DUF4749 Pfam Domain of unknown function DUF4749
Zasp-like_motif SMART Zasp-like motif
PDZ_sf SUPERFAMILY PDZ superfamily
PDZ ProSiteProfiles PDZ domain

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

41 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
stress fiber Hs cellular component
protein binding Hs molecular function
nucleus Hs cellular component
cytoplasm Hs cellular component
cytoskeleton Hs cellular component
cell-cell adherens junction Hs cellular component
focal adhesion Hs cellular component
actin filament organization Hs biological process
heart development Hs biological process
cytoskeletal protein binding Hs molecular function
structural constituent of muscle Hs molecular function
actin cytoskeleton Hs cellular component
Z disc Hs cellular component
cell projection Hs cellular component
metal ion binding Hs molecular function
perinuclear region of cytoplasm Hs cellular component
response to hypoxia Hs biological process
transcription coactivator activity Hs molecular function
transcription factor complex Hs cellular component
endosome Hs cellular component
regulation of transcription, DNA-templated Hs biological process
response to oxidative stress Hs biological process
membrane Hs cellular component
protein phosphatase binding Hs molecular function
lamellipodium Hs cellular component
cell junction Hs cellular component
actin cytoskeleton reorganization Hs biological process
early endosome membrane Hs cellular component
early endosome lumen Hs cellular component
filamentous actin Hs cellular component
recycling endosome lumen Hs cellular component
protein homodimerization activity Hs molecular function
neuron projection Hs cellular component
dendritic spine Hs cellular component
synapse Hs cellular component
postsynaptic membrane Hs cellular component
alpha-actinin binding Hs molecular function
recycling endosome membrane Hs cellular component
extracellular exosome Hs cellular component
cell-cell adhesion Hs biological process
cadherin binding involved in cell-cell adhesion Hs molecular function

GO (Blast)

19 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
stress fiber Hs cellular component 82.8 5.26e-17
ruffle Hs cellular component 82.8 5.26e-17
protein kinase C binding Hs molecular function 81.3 2.19e-16
protein binding Hs molecular function 82.8 5.26e-17
nucleus Hs cellular component 82.8 5.26e-17
cytoplasm Hs cellular component 82.8 5.26e-17
cytosol Hs cellular component 82.8 5.26e-17
cytoskeleton Hs cellular component 82.8 5.26e-17
cell-cell adherens junction Hs cellular component 82.8 5.26e-17
focal adhesion Hs cellular component 82.8 5.26e-17
cytoskeletal protein binding Hs molecular function 81.3 2.19e-16
structural constituent of muscle Hs molecular function 78.6 6.99e-16
actin cytoskeleton Hs cellular component 82.8 5.26e-17
Z disc Hs cellular component 81.3 2.19e-16
pseudopodium Hs cellular component 81.3 2.19e-16
cell projection Hs cellular component 81.3 2.19e-16
metal ion binding Hs molecular function 82.8 5.26e-17
perinuclear region of cytoplasm Hs cellular component 81.3 2.19e-16
muscle alpha-actinin binding Hs molecular function 81.3 2.19e-16

GO (InterProScan)

1 result

GO Term Analysis Type e-value
protein binding SUPERFAMILY molecular function 1.31E-16