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GENE CARD

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  1. Gene 'Moocul.CG.ELv1_2.S68...'

Gene Card

Best human hits

CSDE1

Species

M.oculata

Unique Gene ID

Moocul.g00004509

Gene Model ID

Moocul.CG.ELv1_2.S68632.g04509

Location

S68632:1604..11563

Transcript Models and Sequences

  Moocul.CG.ELv1_2.S68632.g04509.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
Cold-shock_CS ProSitePatterns Cold-shock conserved site
CSP_DNA-bd CDD Cold-shock protein, DNA-binding
NA-bd_OB-fold SUPERFAMILY Nucleic acid-binding, OB-fold
CSP_DNA-bd Pfam Cold-shock protein, DNA-binding
CSD SMART Cold shock domain

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

13 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
nucleic acid binding Hs molecular function
DNA binding Hs molecular function
RNA binding Hs molecular function
protein binding Hs molecular function
cytoplasm Hs cellular component
mitochondrial inner membrane Hs cellular component
Golgi apparatus Hs cellular component
cytosol Hs cellular component
plasma membrane Hs cellular component
regulation of transcription, DNA-templated Hs biological process
male gonad development Hs biological process
CRD-mediated mRNA stability complex Hs cellular component
nuclear-transcribed mRNA catabolic process, no-go decay Hs biological process

GO (Blast)

10 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nucleic acid binding Hs molecular function 362 1.25e-109
DNA binding Hs molecular function 362 1.25e-109
RNA binding Hs molecular function 362 1.25e-109
protein binding Hs molecular function 362 1.25e-109
cytoplasm Hs cellular component 362 1.25e-109
mitochondrial inner membrane Hs cellular component 362 1.25e-109
Golgi apparatus Hs cellular component 362 1.25e-109
cytosol Hs cellular component 362 1.25e-109
plasma membrane Hs cellular component 362 1.25e-109
CRD-mediated mRNA stability complex Hs cellular component 362 1.25e-109

GO (InterProScan)

3 results

GO Term Analysis Type e-value
nucleic acid binding SMART molecular function 4.1E-14
DNA binding Pfam molecular function 6.2E-15
regulation of transcription, DNA-templated Pfam biological process 6.2E-15